Pierrick Roger

Commissariat à l'Énergie Atomique et aux Énergies Alternatives — France

Biochemistry, Genetics and Molecular Biology · Life Sciences

9h-index466citations24works0.32yr avg
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Research Topics

Metabolomics and Mass Spectrometry Studies(13), Scientific Computing and Data Management(7), Bioinformatics and Genomic Networks(5), Biomedical Text Mining and Ontologies(4), Research Data Management Practices(3)

Publications23 total

sqlq: 'SQL' Query Builder
2025Open Access
GNNenrich: a novel method for pathway enrichment analysis based on graph neural network
Bioinformatics·2025· 1 citedOpen Access
mineMS2: annotation of spectral libraries with exact fragmentation patterns
Journal of Cheminformatics·2025· 1 citedOpen Access
mineMS2: Annotation of spectral libraries with exact fragmentation patterns
2025Open Access
mineMS2: Annotation of spectral libraries with exact fragmentation patterns
2025Open Access
mineMS2: Annotation of spectral libraries with exact fragmentation patterns
2025Open Access
sched: Request Scheduler
2024Open Access
fscache: File System Cache
2024Open Access
PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management
Metabolomics·2022· 14 citedOpen Access
ProMetIS, deep phenotyping of mouse models by combined proteomics and metabolomics analysis
Scientific Data·2021· 14 citedOpen Access
ISA API: An open platform for interoperable life science experimental metadata
GigaScience·2021· 33 citedOpen Access
ISA API: An open platform for interoperable life science experimental metadata
2020· 4 citedOpen Access
Workflow4Metabolomics: an international computing infrastructure for Metabolomics
HAL (Le Centre pour la Communication Scientifique Directe)·2019
Interoperable and scalable data analysis with microservices: applications in metabolomics
Bioinformatics·2019· 28 citedOpen Access
Galaxy-Kubernetes integration: scaling bioinformatics workflows in the cloud
2018· 19 citedOpen Access
PhenoMeNal: processing and analysis of metabolomics data in the cloud
GigaScience·2018· 134 citedOpen Access
PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud
2018· 21 citedOpen Access
Workflow4Metabolomics.org - A collaborative research infrastructure for computational metabolomics
Faculty of 1000 Research Ltd·2018Open Access
ISAcreate Galaxy tool for prospective data management with ISA format support – application to metabolomics datasets
Faculty of 1000 Research Ltd·2018· 2 citedOpen Access
Interoperable and scalable data analysis with microservices: Applications in Metabolomics
2017· 8 citedOpen Access
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Frequent Co-authors

Etienne Thévenot(14), David Johnson(8), Pablo Moreno(8), Luca Pireddu(8), Philippe Rocca‐Serra(8), Alejandra González-Beltrán(7), Susanna‐Assunta Sansone(7), Alexis Delabrière(7), Kenneth Haug(6), Ralf J. M. Weber(6), Christoph Steinbeck(6), Massimiliano Izzo(5), Namrata Kale(5), Anders Larsson(5), Steffen Neumann(5), Christoph Ruttkies(5), Reza M. Salek(5), Ola Spjuth(5), Daniel Schober(5), Christophe Dupérier(5)