Mahmoud Naghibzadeh

Ferdowsi University of Mashhad — IR

Computer Science · Physical Sciences

24h-index3.2kcitations232works2.72yr avg
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Research Topics

Distributed and Parallel Computing Systems(46), Real-Time Systems Scheduling(44), Parallel Computing and Optimization Techniques(37), Cloud Computing and Resource Management(35), Embedded Systems Design Techniques(23)

Publications232 total

Characterizing Microsatellite Distribution Patterns Across Distinct Gene Categories in Human
2025
Accelerating long-read overlap detection for genome assembly with a two-hash table strategy
Computational Biology and Chemistry·2025· 1 cited
Optimizing sparse matrix partitioning in a heterogeneous CPU-GPU system for high-performance
Computing·2025
Optimizing Geo-Distributed Data Processing with Resource Heterogeneity over the Internet
ACM Transactions on Internet Technology·2024Open Access
Fast and Accurate Motif Discovery in Protein Sequences Using Parallel Processing with OpenMP
2024
A high-performance dynamic scheduling for sparse matrix-based applications on heterogeneous CPU–GPU environment
The Journal of Supercomputing·2024· 2 cited
Analyzing the performance of short-read classification tools on metagenomic samples toward proper diagnosis of diseases
Journal of Bioinformatics and Computational Biology·2024· 17 cited
Many-BSP: an analytical performance model for CUDA kernels
Computing·2024
Efficient Motif Discovery in Protein Sequences Using a Branch and Bound Algorithm
IEEE Journal of Biomedical and Health Informatics·2024· 4 cited
A Cloud Broker for Executing Deadline-Constrained Periodic Scientific Workflows
IEEE Transactions on Services Computing·2023· 17 cited
A Novel Multi-head Algorithm to Discover all Tandem Repeats in One Scan of DNA Sequences
Research Square (Research Square)·2023Open Access
RPTRF: A rapid perfect tandem repeat finder tool for DNA sequences
Biosystems·2023· 22 cited
The Eficient Alignment of Long DNA Sequences Using Divide and Conquer Approach
International Journal of Information & Communication Technology Research·2022Open Access
Fairness-driven integrated multi-prosumer load scheduling incorporating solar energy
Sustainable Energy Technologies and Assessments·2022· 3 cited
EDQWS: an enhanced divide and conquer algorithm for workflow scheduling in cloud
Journal of Cloud Computing Advances Systems and Applications·2022· 39 citedOpen Access
CDA: a novel multicore scheduling for cost-aware deadline-constrained scientific workflows on the IaaS cloud
The Journal of Supercomputing·2022· 2 cited
LPTD: a novel linear programming-based topology determination method for cryo-EM maps
Bioinformatics·2022· 1 citedOpen Access
Online energy-efficient fair scheduling for heterogeneous multi-cores considering shared resource contention
The Journal of Supercomputing·2022· 12 cited
Three-Dimensional Graph Matching to Identify Secondary Structure Correspondence of Medium-Resolution Cryo-EM Density Maps
Biomolecules·2021· 3 citedOpen Access
Linked List Elimination from Hashing Methods
Research Reports on Computer Science·2021Open Access
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Frequent Co-authors

Saeid Abrishami(10), Peyman Neamatollahi(9), Mohammad Hossein Yaghmaee(6), Abdorreza Savadi(6), Hadi Sadoghi Yazdi(5), Hoda Taheri(5), Dick Epema(4), Babak Khorsand(4), Mostafa Sabzekar(4), Yasser Sedaghat(3), Kobra Etminani(2), Jalal A. Nasiri(2), Bahram Naghibzadeh(2), Hamid Noori(2), Ghazaleh Khojasteh Toussi(2), S.‐Kazem Shekofteh(2), Samaneh Sadat Mousavi Nik(2), Reza Ramezani(2), Amin Rezaeian(2), Ossama Younis(1)