Stéphane Cruveiller

Biochemistry, Genetics and Molecular Biology · Life Sciences

43h-index9.8kcitations107works0.02yr avg
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Research Topics

Genomics and Phylogenetic Studies(32), Legume Nitrogen Fixing Symbiosis(21), RNA and protein synthesis mechanisms(17), Bacterial Genetics and Biotechnology(13), Vibrio bacteria research studies(12)

Publications107 total

Evaluation of a viral transcriptome Next Generation Sequencing assay as an alternative to animal assays for viral safety testing of cell substrates
Vaccine·2023· 5 cited
Metagenomic shotgun sequencing of blood to identify bacteria and viruses in leukemic febrile neutropenia
PLoS ONE·2022· 12 citedOpen Access
Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
PLoS Computational Biology·2021· 6 citedOpen Access
Effect of arsenite and growth in biofilm conditions on the evolution of Thiomonas sp. CB2
Microbial Genomics·2020· 2 citedOpen Access
Repeated horizontal gene transfers triggered parallel evolution of magnetotaxis in two evolutionary divergent lineages of magnetotactic bacteria
The ISME Journal·2020· 32 citedOpen Access
High-Throughput Sequencing (HTS) of newly synthetized RNAs enables one shot detection and identification of live mycoplasmas and differentiation from inert nucleic acids
Biologicals·2020· 1 citedOpen Access
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
PLoS Computational Biology·2020· 240 citedOpen Access
Modulation of Quorum Sensing as an Adaptation to Nodule Cell Infection during Experimental Evolution of Legume Symbionts
mBio·2020· 22 citedOpen Access
PPanGGOLiN: depicting microbial diversity via a partitioned pangenome graph
2019· 22 citedOpen Access
Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids
mSphere·2019· 15 citedOpen Access
The Arginine Deiminase Operon Is Responsible for a Fitness Trade-Off in Extended-Spectrum-β-Lactamase-Producing Strains of Escherichia coli
Antimicrobial Agents and Chemotherapy·2019· 14 citedOpen Access
Complete Genome Sequence of <i>Bradyrhizobium</i> sp. Strain ORS3257, an Efficient Nitrogen-Fixing Bacterium Isolated from Cowpea in Senegal
Microbiology Resource Announcements·2019· 5 citedOpen Access
Author Correction: Parallels between experimental and natural evolution of legume symbionts
Nature Communications·2018Open Access
Extended-spectrum β-lactamase-encoding genes are spreading on a wide range of Escherichia coli plasmids existing prior to the use of third-generation cephalosporins
Microbial Genomics·2018· 43 citedOpen Access
Genomic study of a novel magnetotactic <i>Alphaproteobacteria</i> uncovers the multiple ancestry of magnetotaxis
Environmental Microbiology·2018· 39 cited
Transcriptome Profiles of Nod Factor-independent Symbiosis in the Tropical Legume Aeschynomene evenia
Scientific Reports·2018· 33 citedOpen Access
Parallels between experimental and natural evolution of legume symbionts
Nature Communications·2018· 21 citedOpen Access
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation
BMC Genomics·2018· 49 citedOpen Access
PathoTRACK: Toward a complete analytical chain of NGS data for the detection and identification of pathogenic organisms
HAL (Le Centre pour la Communication Scientifique Directe)·2018
Parallels between experimental and natural evolution of legume symbionts
2018Open Access
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Frequent Co-authors

Claudine Médigue(33), David Vallenet(18), Valérie Barbe(16), Zoé Rouy(16), David Roche(11), Sophie Mangenot(10), Aurélie Lajus(9), Olivier Tenaillon(8), Dominique Schneider(7), Eduardo P. C. Rocha(6), Richard E. Lenski(6), Delphine Capela(6), Catherine Masson‐Boivin(6), Alexandra Calteau(5), Antoine Danchin(5), Carole Dossat(5), Béatrice Segurens(5), Jeffrey E. Barrick(5), Grégory Salvignol(5), Jean Weissenbach(5)