Karsten Hokamp

Trinity College Dublin — Ireland

Agricultural and Biological Sciences · Life Sciences

42h-index31.9kcitations137works2.82yr avg
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Research Topics

Salmonella and Campylobacter epidemiology(18), Bacteriophages and microbial interactions(16), Vibrio bacteria research studies(16), Bacterial Genetics and Biotechnology(13), Fungal and yeast genetics research(13)

Publications136 total

Differential roles of the type I and II secretion systems for the intracellular ABC141 Acinetobacter baumannii infection, which elicits an atypical hypoxia response in endothelial cells
PLoS Pathogens·2026Open Access
Methylome and transcriptome mapping reveal miniscule DNA methyltransferase regulons in <i>Salmonella enterica</i> serovar Typhimurium
2026Open Access
Transcriptomic analysis of Streptococcus pneumoniae serotype 1 reveals serotype-specific gene regulation
Microbial Genomics·2025Open Access
Invasive Acinetobacter baumannii ABC141 strain relies on the twin-arginine translocation export system for adhesion to host cells
Microbiology·2025· 1 citedOpen Access
Development of two compatible plasmids to assess sRNA-mediated post-transcriptional regulation in Acinetobacter baumannii
Microbiology·2025Open Access
Circulating tumour cells are a prognostic indicator in advanced high-grade serous ovarian cancer and are associated with platelets and immune cells following dissemination
British Journal of Cancer·2025· 2 citedOpen Access
BOSC 2025, the 26th Bioinformatics Open Source Conference
F1000Research·2025Open Access
Dominant-negative effects of Weaver syndrome-associated EZH2 variants
Genes & Development·2025· 4 citedOpen Access
DNA uptake and twitching motility are controlled by the small RNA Arp through repression of pilin translation in <i>Acinetobacter baumannii</i>
2025Open Access
Development of two compatible plasmids to assess sRNA-mediated post-transcriptional regulation in <i>Acinetobacter baumannii</i>
2025· 1 citedOpen Access
Differential roles of the type I and II secretion systems for the intracellular ABC141 <i>Acinetobacter baumannii</i> infection, which elicits an atypical hypoxia response in endothelial cells
2025· 1 citedOpen Access
Profiling Salmonella transcriptional dynamics during macrophage infection using a comprehensive reporter library
Nature Microbiology·2025· 7 citedOpen Access
25 Years of BOSC, the Bioinformatics Open Source Conference
F1000Research·2024Open Access
Bioenergetic and Metabolic Profiling of a Triple Negative Breast Cancer Cell Line and its High Invasive Isogenic Subtype
Biochimica et Biophysica Acta (BBA) - Bioenergetics·2024
Global analysis of the RNA–RNA interactome in <i>Acinetobacter baumannii</i> AB5075 uncovers a small regulatory RNA repressing the virulence-related outer membrane protein CarO
Nucleic Acids Research·2024· 13 citedOpen Access
High-throughput fitness experiments reveal specific vulnerabilities of human-adapted Salmonella during stress and infection
Nature Genetics·2024· 14 citedOpen Access
The influence of flocculation upon global gene transcription in a yeast CYC8 mutant
Microbial Genomics·2024Open Access
<i>Salmonella enterica</i> serovar Typhimurium ST313 sublineage 2.2 has emerged in Malawi with a characteristic gene expression signature and a fitness advantage
microLife·2024· 8 citedOpen Access
Plasminogen activator inhibitor 1 is associated with high-grade serous ovarian cancer metastasis and is reduced in patients who have received neoadjuvant chemotherapy
Frontiers in Cell and Developmental Biology·2023· 8 citedOpen Access
BOSC 2023, the 24th annual Bioinformatics Open Source Conference
F1000Research·2023Open Access
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Frequent Co-authors

Jay C. D. Hinton(10), Fiona Roche(7), Carsten Kröger(7), Kate E. Killick(7), David E. MacHugh(7), Sathesh K. Sivasankaran(6), John A. Browne(6), Eamonn Gormley(6), David A. Magee(6), Kenneth H. Wolfe(5), Fiona S. L. Brinkman(5), Aoife McLysaght(5), Darren J. Fitzpatrick(5), Nicolas Nalpas(5), Stephen D. E. Park(5), Robert E. W. Hancock(4), Aoife Colgan(4), Disa L. Hammarlöf(4), Andrew D. S. Cameron(4), Charles J. Dorman(4)