Dong‐Jun Yu

Fullerton College — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

42h-index6.0kcitations208works5.02yr avg
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Research Topics

Machine Learning in Bioinformatics(97), RNA and protein synthesis mechanisms(53), Protein Structure and Dynamics(44), Computational Drug Discovery Methods(37), Genomics and Phylogenetic Studies(30)

Publications208 total

Enhancing Positioning Accuracy of FAST Feed Cabin in GPS-Denied Environments: A LSTM-MMAE Fusion Model for IMU Drift Suppression
Arabian Journal for Science and Engineering·2025
SMENET: A Multi-View Semantic Model for Multi-Level Enzyme Function Prediction
IEEE Transactions on Computational Biology and Bioinformatics·2025
Deciphering RNA–ligand binding specificity with GerNA-Bind
Nature Machine Intelligence·2025
METFAN: Multisource Enhanced Therapeutic Peptide Function Prediction via Adapter Network
ACS Omega·2025Open Access
Learning conformational flexibility of immune receptors
Nature Machine Intelligence·2025
Integrating Graph Convolutional Networks for Missing Gene Expression Imputation
IEEE Transactions on Computational Biology and Bioinformatics·2025
DMMAFS: Protein Function Prediction Based on Multi-Modal Multi-Attention Fusion Features
IEEE Transactions on Computational Biology and Bioinformatics·2025
MutPNI: A Unified Model Architecture for Accurately Predicting the Effects of Mutations on Protein-Nucleic Acid Interactions
Journal of Chemical Information and Modeling·2025· 2 cited
ASCE-PPIS: A Protein-Protein Interaction Sites Predictor Based on Equivariant Graph Neural Network with Fusion of Structure-Aware Pooling and Graph Collapse
Bioinformatics·2025Open Access
De novo design of functionally diverse and druggable antimicrobial peptides by diffusion and multimodal deep learning
2025Open Access
A Deep Learning-based Method for Drug Molecule Representation and Property Prediction
2025
Self-iterative multiple-instance learning enables the prediction of CD4+ T cell immunogenic epitopes
Nature Machine Intelligence·2025· 2 citedOpen Access
MKFGO: integrating multi-source knowledge fusion with pretrained language model for high-accuracy protein function prediction
Briefings in Bioinformatics·2025Open Access
Dual-Branch Contrastive Network with Deep Separable Convolution for Enhanced 6mA Site Identification
Journal of Chemical Information and Modeling·2025
Molecular detection of Anaplasma phagocytophilum and Rickettsia monacensis in trombiculid mite pools collected from wild rodents in Korea: Implications for potential mite-borne transmission
Infection Genetics and Evolution·2025Open Access
TransABseq: A Two-Stage Approach for Predicting Antigen–Antibody Binding Affinity Changes upon Mutation Based on Protein Sequences
Journal of Chemical Information and Modeling·2025· 2 cited
Structure-Directed Pan-Specific T-Cell Receptor–Peptide-Major Histocompatibility Complex Interaction Prediction
Journal of Chemical Information and Modeling·2025· 3 cited
m2ST: dual multi-scale graph clustering for spatially resolved transcriptomics
Bioinformatics·2025· 1 citedOpen Access
PScL-SDNNMAE: Protein Subcellular Localization Prediction Using Classical and Masked Autoencoder-Based Multi-View Features With Ensemble Feature Selection
IEEE Transactions on Computational Biology and Bioinformatics·2025
MKFGO: Integrating Multi-Source Knowledge Fusion with Pre-Trained Language Model for High-Accuracy Protein Function Prediction
2025
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Frequent Co-authors

Hong‐Bin Shen(15), Jun Hu(14), Jingyu Yang(12), Xibei Yang(11), Yang Zhang(7), Muhammad Arif(7), Muhammad Kabir(6), Jiangning Song(5), Ke Han(5), Yang Li(4), Chengxin Zhang(4), Jingyu Yang(4), Fang Ge(4), Saeed Ahmed(4), Hualong Yu(3), Zi Liu(3), Yiheng Zhu(3), Xiaoning Song(3), Yong Qi(3), Farman Ali(3)