Regina Barzilay

Jambi University — ID

Computer Science · Physical Sciences

89h-index31.8kcitations390works33.62yr avg
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Research Topics

Topic Modeling(167), Natural Language Processing Techniques(130), Computational Drug Discovery Methods(85), Machine Learning in Materials Science(71), Advanced Text Analysis Techniques(32)

Publications390 total

Atom-level enzyme active site scaffolding using RFdiffusion2
Nature Methods·2025· 10 citedOpen Access
BoltzGen: Toward Universal Binder Design
2025· 10 citedOpen Access
Interim Results of the CMML scrna-seq atlas: GMP skewing is independently associated with overall survival in CMML.
Blood·2025
Author Correction: Discovery and artificial intelligence-guided mechanistic elucidation of a narrow-spectrum antibiotic
Nature Microbiology·2025Open Access
Discovery and artificial intelligence-guided mechanistic elucidation of a narrow-spectrum antibiotic
Nature Microbiology·2025· 5 cited
Influenza vaccine strain selection with an AI-based evolutionary and antigenicity model
Nature Medicine·2025· 5 citedOpen Access
Redefining druggable targets with artificial intelligence
Nature Biotechnology·2025· 1 cited
ProxelGen: Generating Proteins as 3D Densities.
PubMed·2025
Boltz-2: Towards Accurate and Efficient Binding Affinity Prediction
2025· 236 citedOpen Access
AI-driven discovery of synergistic drug combinations against pancreatic cancer
Nature Communications·2025· 14 citedOpen Access
Hierarchical protein backbone generation with latent and structure diffusion
arXiv (Cornell University)·2025Open Access
Atom level enzyme active site scaffolding using RFdiffusion2
2025· 32 citedOpen Access
Protein codes promote selective subcellular compartmentalization
Science·2025· 55 cited
Deep learning enhances the prediction of HLA class I-presented CD8+ T cell epitopes in foreign pathogens
Nature Machine Intelligence·2025· 12 citedOpen Access
Artificial Intelligence for Science in Quantum, Atomistic, and Continuum Systems
Foundations and Trends® in Machine Learning·2025· 6 cited
Boltz-1 Democratizing Biomolecular Interaction Modeling
2024· 295 citedOpen Access
Predicting sub-population specific viral evolution
arXiv (Cornell University)·2024Open Access
Identifying biological perturbation targets through causal differential networks
arXiv (Cornell University)·2024· 1 citedOpen Access
VaxSeer: Selecting influenza vaccine strains through evolutionary and antigenicity models
2024Open Access
OpenChemIE: An Information Extraction Toolkit for Chemistry Literature
Journal of Chemical Information and Modeling·2024· 15 cited
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Frequent Co-authors

Tommi Jaakkola(20), Wengong Jin(9), Connor W. Coley(7), Klavs F. Jensen(7), Kathleen McKeown(6), Adam Yala(5), Kevin Yang(4), Kyle Swanson(4), William H. Green(4), Constance D. Lehman(4), Tal Schuster(4), Mirella Lapata(4), Gabriele Corso(4), Anush Chiappino-Pepe(3), Miriam Mathea(3), Tally Portnoi(3), H. Stärk(3), Jeremy Wohlwend(3), Vasileios Hatzivassiloglou(3), Judith L. Klavans(3)