Orlando Contreras‐López

Khyber Teaching Hospital — Pakistan

Agricultural and Biological Sciences · Life Sciences

9h-index989citations16works1.82yr avg
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Research Topics

Plant Stress Responses and Tolerance(4), Genomics and Phylogenetic Studies(4), Plant Molecular Biology Research(4), Plant nutrient uptake and metabolism(4), Single-cell and spatial transcriptomics(3)

Publications16 total

Tech Note: Simplified protocol for SMARTer Pico kit
2025Open Access
Tech Note - Adaptive Sampling: targeted Oxford Nanopore long-read sequencing
2025Open Access
Isoform-Level Analysis of 10x Genomics Single-Cell cDNA Libraries from Cultured K562 Cells Using Long-Read Sequencing
2025Open Access
Adapter dilution and input optimization for Qiagen QIAseq miRNA Library kit
2025· 1 citedOpen Access
Convergent and lineage-specific genomic changes shape adaptations in sugar-consuming birds
2024· 10 citedOpen Access
Fragmentation of genomic DNA using Covaris g-Tubes prior to library preparation for sequencing
2024Open Access
Long-read whole-genome analysis of human single cells
Nature Communications·2023· 45 citedOpen Access
Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate
Proceedings of the National Academy of Sciences·2022· 47 citedOpen Access
Plant ecological genomics at the limits of life in the Atacama Desert
Proceedings of the National Academy of Sciences·2021· 99 citedOpen Access
Long-read whole genome analysis of human single cells
2021· 9 citedOpen Access
Revealing hidden plant diversity in arid environments
Ecography·2020· 37 citedOpen Access
Step-by-Step Construction of Gene Co-expression Networks from High-Throughput Arabidopsis RNA Sequencing Data
Methods in molecular biology·2018· 59 cited
Nitrate induction of root hair density is mediated by <scp>TGA</scp>1/<scp>TGA</scp>4 and <scp>CPC</scp> transcription factors in <i>Arabidopsis thaliana</i>
The Plant Journal·2017· 135 citedOpen Access
Constructing Simple Biological Networks for Understanding Complex High-Throughput Data in Plants
Methods in molecular biology·2015· 7 cited
Systems approach identifies <scp>TGA</scp>1 and <scp>TGA</scp>4 transcription factors as important regulatory components of the nitrate response of <i><scp>A</scp>rabidopsis thaliana</i> roots
The Plant Journal·2014· 322 citedOpen Access
Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of<i>Arabidopsis thaliana</i>roots
Proceedings of the National Academy of Sciences·2013· 218 citedOpen Access

Frequent Co-authors

Rodrigo A. Gutiérrez(8), Tomás C. Moyano(5), Elena A. Vidal(4), José M. Álvarez(3), Eleodoro Riveras(3), Daniela C. Soto(3), Remi‐André Olsen(3), Nick Crang(3), Francisca P. Díaz(2), Gabriela Carrasco‐Puga(2), Claudio Latorre(2), Gloria M. Coruzzi(2), Joanna Hård(2), Jeff E. Mold(2), Jesper Eisfeldt(2), Christian Tellgren‐Roth(2), Susana Häggqvist(2), Ignas Bunikis(2), Chen-Shan Chin(2), Jessica Nordlund(2)