Chengyue Gong

The University of Texas at Austin — United States

Computer Science · Physical Sciences

21h-index1.5kcitations77works7.32yr avg
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Research Topics

Topic Modeling(22), Natural Language Processing Techniques(15), Advanced Neural Network Applications(14), Domain Adaptation and Few-Shot Learning(13), Multimodal Machine Learning Applications(11)

Publications77 total

Enzyme Classification via Semi-Supervised Functional Residue Learning
2026Open Access
XDXD: End-to-end crystal structure determination with low resolution X-ray diffraction
arXiv (Cornell University)·2025Open Access
Protenix-Mini+: efficient structure prediction model with scalable pairformer
arXiv (Cornell University)·2025Open Access
PXDesign: Fast, Modular, and Accurate De Novo Design of Protein Binders
2025· 4 citedOpen Access
Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM
arXiv (Cornell University)·2025Open Access
Efficient management of medical image datasets for content-based case retrieval via sparse annotation and bidirectional label propagation
Data Science and Management·2025Open Access
Clinical evaluation of a polarization-based optical noninvasive glucose sensing system
Scientific Reports·2025· 8 citedOpen Access
Theoretical Guarantees for High Order Trajectory Refinement in Generative Flows
arXiv (Cornell University)·2025Open Access
On Computational Limits of FlowAR Models: Expressivity and Efficiency
arXiv (Cornell University)·2025Open Access
High-Order Matching for One-Step Shortcut Diffusion Models
arXiv (Cornell University)·2025Open Access
RichSpace: Enriching Text-to-Video Prompt Space via Text Embedding Interpolation
arXiv (Cornell University)·2025Open Access
Protenix - Advancing Structure Prediction Through a Comprehensive AlphaFold3 Reproduction
2025· 73 citedOpen Access
Rectified Flow For Structure Based Drug Design
arXiv (Cornell University)·2024Open Access
Distilling Structural Representations into Protein Sequence Models
2024· 6 citedOpen Access
Clinical Evaluation of a Polarization-Based Optical Noninvasive Glucose Sensing System
2024Open Access
Stability Oracle: a structure-based graph-transformer framework for identifying stabilizing mutations
Nature Communications·2024· 51 citedOpen Access
Switchable Decision: Dynamic Neural Generation Networks
arXiv (Cornell University)·2024Open Access
Language Rectified Flow: Advancing Diffusion Language Generation with Probabilistic Flows
arXiv (Cornell University)·2024Open Access
Layer Compression of Deep Networks with Straight Flows
Proceedings of the AAAI Conference on Artificial Intelligence·2024· 2 citedOpen Access
LanguageFlow: Advancing Diffusion Language Generation with Probabilistic Flows
2024· 1 citedOpen Access
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Frequent Co-authors

Qiang Liu(12), Dilin Wang(11), Xingchao Liu(11), Vikas Chandra(8), Shujian Zhang(8), Mao Ye(7), Lemeng Wu(7), Meng Li(6), Qiang Liu(5), Adam R. Klivans(5), Tao Qin(3), Qiang Liu(3), Daniel J. Diaz(3), Jeffrey Ouyang-Zhang(3), Eunsol Choi(3), Zhanxing Zhu(3), Feng Qian(2), Xu Tan(2), Liwei Wang(2), Tie‐Yan Liu(2)