Ron Kikinis

Brigham and Women's Hospital — United States

Computer Science · Physical Sciences

102h-index54.1kcitations632works1.72yr avg
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Research Topics

Medical Image Segmentation Techniques(154), Advanced Neuroimaging Techniques and Applications(136), Advanced MRI Techniques and Applications(99), Radiomics and Machine Learning in Medical Imaging(89), Medical Imaging Techniques and Applications(64)

Publications631 total

Benchmarking of deep learning methods for generic MRI multi-organ abdominal segmentation
Journal of Medical Imaging·2025Open Access
The Cancer Imaging Data Commons: Paving the Way for Open Science
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition·2025
Medical Image Registration Meets Vision Foundation Model: Prototype Learning and Contour Awareness
Lecture notes in computer science·2025· 1 cited
Benchmarking of Deep Learning Methods for Generic MRI Multi-Organ Abdominal Segmentation
arXiv (Cornell University)·2025Open Access
AMNCutter: Affinity-Attention-Guided Multi-View Normalized Cutter for Unsupervised Surgical Instrument Segmentation
2025
Medical Image Registration Meets Vision Foundation Model: Prototype Learning and Contour Awareness
arXiv (Cornell University)·2025· 1 citedOpen Access
LNQ 2023 challenge: Benchmark of weakly-supervised techniques for mediastinal lymph node quantification
The Journal of Machine Learning for Biomedical Imaging·2025· 4 citedOpen Access
Automated Segmentation of Trunk Musculature with a Deep CNN Trained from Sparse Annotations in Radiation Therapy Patients with Metastatic Spine Disease
2025· 1 citedOpen Access
An effective and open source interactive 3D medical image segmentation solution
Scientific Reports·2024· 4 citedOpen Access
Tractography‐Based Automated Identification of Retinogeniculate Visual Pathway With Novel Microstructure‐Informed Supervised Contrastive Learning
Human Brain Mapping·2024· 2 citedOpen Access
AMNCutter: Affinity-Attention-Guided Multi-View Normalized Cutter for Unsupervised Surgical Instrument Segmentation
arXiv (Cornell University)·2024Open Access
Revisiting Surgical Instrument Segmentation Without Human Intervention: A Graph Partitioning View
2024· 2 citedOpen Access
SAT-Morph: Unsupervised Deformable Medical Image Registration Using Vision Foundation Models with Anatomically Aware Text Prompt
Lecture notes in computer science·2024· 3 cited
Facial Nerve Tractography Using Diffusion MRI: A Comparison of Acquisition b-Values and Single- and Multifiber Tracking Strategies
Otology & Neurotology·2024· 3 citedOpen Access
Revisiting Surgical Instrument Segmentation Without Human Intervention: A Graph Partitioning View
arXiv (Cornell University)·2024Open Access
LNQ 2023 challenge: Benchmark of weakly-supervised techniques for mediastinal lymph node quantification
arXiv (Cornell University)·2024Open Access
A novel deep learning method for automated identification of the retinogeniculate pathway using dMRI tractography
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition·2024
End-to-end reproducible AI pipelines in radiology using the cloud
Nature Communications·2024· 12 citedOpen Access
Supplementary Video S2 from <i>dcmqi</i>: An Open Source Library for Standardized Communication of Quantitative Image Analysis Results Using DICOM
2024Open Access
Supplementary Video S1 from <i>dcmqi</i>: An Open Source Library for Standardized Communication of Quantitative Image Analysis Results Using DICOM
2024Open Access
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Frequent Co-authors

Ferenc A. Jólesz(28), Robert W. McCarley(14), Simon K. Warfield(11), Martha E. Shenton(11), Marek Kubicki(7), Stephan E. Maier(6), Dean F. Salisbury(5), Melissa Frumin(5), William M. Wells(4), Cynthia G. Wible(4), Guido Gerig(4), C.-F. Westin(4), Petra S. Hüppi(4), Gary P. Zientara(4), Joseph J. Volpe(4), Sonia Pujol(3), Steve Pieper(3), Hiroto Hokama(3), A. Nabavi(3), Hae‐Jeong Park(3)