Jeff J. Doyle

Cornell University — United States

Agricultural and Biological Sciences · Life Sciences

78h-index22.8kcitations293works4.82yr avg
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Research Topics

Legume Nitrogen Fixing Symbiosis(71), Chromosomal and Genetic Variations(59), Genomics and Phylogenetic Studies(53), Plant Taxonomy and Phylogenetics(50), Plant Diversity and Evolution(46)

Publications293 total

The polyploid continuum and the landscape of polyploid genomic variation
American Journal of Botany·2025· 2 citedOpen Access
Diploidization in a wild rice allopolyploid is both episodic and gradual
Proceedings of the National Academy of Sciences·2025· 3 citedOpen Access
One versus many independent assemblies of symbiotic nitrogen fixation in flowering plants
Nature Communications·2025· 4 citedOpen Access
Nuclear phylogenomics of Eperua (Leguminosae) highlights the role of habitat and morphological lability in dispersal and diversification across Amazonia and in the Caatinga-Cerrado ecotone
Molecular Phylogenetics and Evolution·2024· 2 cited
The topography of gene tree topology space in a plant genus with a legacy of recent polyploidy and introgression
2024Open Access
Loss of Lateral suppressor gene is associated with evolution of root nodule symbiosis in Leguminosae
Genome biology·2024· 7 citedOpen Access
Data‐driven guidelines for phylogenomic analyses using SNP data
Applications in Plant Sciences·2024· 3 citedOpen Access
Duplication and sub‐functionalization of flavonoid biosynthesis genes plays important role in Leguminosae root nodule symbiosis evolution
Journal of Integrative Plant Biology·2024· 17 citedOpen Access
nQuack: An R package for predicting ploidal level from sequence data using site‐based heterozygosity
Applications in Plant Sciences·2024· 15 citedOpen Access
nQuack: An R package for predicting ploidal level from sequence data using site-based heterozygosity
2024Open Access
A Nuclear Phylogenomic Study of the Eperua S.L. Clade (Leguminosae, Detarioideae) Provides New Insights into Plant Diversification in Amazonia
SSRN Electronic Journal·2024Open Access
Comparative phylogenomic analyses of SNP versus full locus datasets: insights and recommendations for researchers
2023· 2 citedOpen Access
Genomic Relationships of <i>Glycine remota</i>, a Recently Discovered Perennial Relative of Soybean, within <i>Glycine</i>
Systematic Botany·2023· 9 cited
Cell types as species: Exploring a metaphor
Frontiers in Plant Science·2022· 7 citedOpen Access
The recipe for cytonuclear interaction begins with a superabundance of plastid and mitochondrial mRNAs
Proceedings of the National Academy of Sciences·2022· 1 citedOpen Access
A Statewide Collaboration to Deliver and Evaluate a Pediatric Critical Care Simulation Curriculum for Emergency Medical Services
Frontiers in Pediatrics·2022· 13 citedOpen Access
Molecular phylogenetics of<i>Euploca</i>(Boraginaceae): homoplasy in many characters, including the C4 photosynthetic pathway
Botanical Journal of the Linnean Society·2021· 9 citedOpen Access
Fifteen compelling open questions in plant cell biology
The Plant Cell·2021· 54 citedOpen Access
Defining Coalescent Genes: Theory Meets Practice in Organelle Phylogenomics
Systematic Biology·2021· 117 cited
Whole‐Genome Sequence of Synthesized Allopolyploids in <i>Cucumis</i> Reveals Insights into the Genome Evolution of Allopolyploidization
Advanced Science·2021· 35 citedOpen Access
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Frequent Co-authors

Pamela S. Soltis(8), Jane L. Doyle(6), Jeffrey D. Palmer(5), Ashley N. Egan(4), Nevin D. Young(3), Steven B. Cannon(3), Matt Lavin(3), Elizabeth Dickson(3), Tadashi Kajita(3), Hiroyoshi Ōhashi(3), A. H. D. Brown(3), Jeremy E. Coate(3), Jessica A. Schlueter(3), Randy C. Shoemaker(3), Bernard E. Pfeil(3), René Geurts(2), Klaus Mayer(2), M. Spannagl(2), Arnaud Couloux(2), Roxanne Denny(2)