Koji Yahara

National Institute of Infectious Diseases — Japan

Biochemistry, Genetics and Molecular Biology · Life Sciences

32h-index3.5kcitations170works4.32yr avg
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Research Topics

Antibiotic Resistance in Bacteria(31), Helicobacter pylori-related gastroenterology studies(24), Genomics and Phylogenetic Studies(23), Bacterial Identification and Susceptibility Testing(22), Salmonella and Campylobacter epidemiology(17)

Publications168 total

PATH-SAFE Consortium Recommendations for Genomic Surveillance of Foodborne Diseases, Using Salmonella as an Exemplar
FSA research and evidence.·2025Open Access
Corrigendum to “In vitro activity of cefiderocol against carbapenemase-producing and meropenem-non-susceptible Gram-negative bacteria collected in the Japan Antimicrobial Resistant Bacterial Surveillance” [Journal of Global Antimicrobial Resistance 38 (2024) 12–20]
Journal of Global Antimicrobial Resistance·2025Open Access
<i>Helicobacter pylori</i> base-excision restriction enzyme in stomach carcinogenesis
PNAS Nexus·2025· 1 citedOpen Access
Specific variants in <i>ftsI</i> reduce carbapenem susceptibility in <i>Pseudomonas aeruginosa</i>
Microbiology Spectrum·2025· 3 citedOpen Access
Clinical outcomes of flomoxef versus cefmetazole in hospitalized patients with urinary tract infections: combined retrospective analyses of two real-world databases and in vitro data
BMC Medicine·2025Open Access
Studies of atmospheric climate forcers in the Arctic during the ArCS II project
Polar Science·2025· 2 cited
Staphylococcus aureus ST764-SCCmecII high-risk clone in bloodstream infections revealed through national genomic surveillance integrating clinical data
Nature Communications·2025· 12 citedOpen Access
Emergence and genetic characterization of KLUC-3 extended-spectrum β-lactamase-producing Escherichia coli ST95 High-Risk clone causing nosocomial infection in Japan
Journal of Global Antimicrobial Resistance·2024Open Access
Enhanced automated detection of outbreaks of a rare antimicrobial-resistant bacterial species
PLoS ONE·2024· 5 citedOpen Access
Lipid Fingerprinting by MALDI Biotyper Sirius Instrument Fails to Differentiate the Three Subspecies of the <i>Mycobacterium abscessus</i> Complex
2024Open Access
Staphylococcus aureus ST764-SCCmecII high-risk clone in bloodstream infections revealed through national genomic surveillance integrating clinical data
2024Open Access
Clinical outcomes of flomoxef versus cefmetazole in hospitalized patients with urinary tract infections: Combined retrospective analyses of two real-world databases and <i>in vitro</i> data
2024Open Access
In vitro activity of cefiderocol against carbapenemase-producing and meropenem-non-susceptible Gram-negative bacteria collected in the Japan Antimicrobial Resistant Bacterial Surveillance
Journal of Global Antimicrobial Resistance·2024· 21 citedOpen Access
Development of selective isolation media for detecting the genera Actinomyces and Schaalia from oral specimens containing indigenous bacteria
Access Microbiology·2024· 1 citedOpen Access
Shotgun metagenomic analysis of saliva microbiome suggests Mogibacterium as a factor associated with chronic bacterial osteomyelitis
PLoS ONE·2024· 2 citedOpen Access
Emergence of an IncX3 plasmid co-harbouring the carbapenemase genes <i>bla</i>NDM-5 and <i>bla</i>OXA-181
JAC-Antimicrobial Resistance·2024· 5 citedOpen Access
Epistasis, core-genome disharmony, and adaptation in recombining bacteria
mBio·2024· 11 citedOpen Access
Nationwide genome surveillance of carbapenem-resistant <i>Pseudomonas aeruginosa</i> in Japan
Antimicrobial Agents and Chemotherapy·2024· 24 citedOpen Access
Development of selective isolation media for detecting Actinomyces and Schaalia genera from oral specimens containing indigenous bacteria
2024Open Access
Comparison of disease and economic burden between MRSA infection and MRSA colonization in a university hospital: a retrospective data integration study
Antimicrobial Resistance and Infection Control·2024· 14 citedOpen Access
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Frequent Co-authors

Samuel K. Sheppard(16), Guillaume Méric(11), Ben Pascoe(11), Ichizo Kobayashi(11), Aki Hirabayashi(10), Leonardos Mageiros(9), Keith A. Jolley(9), Martin Maiden(9), Motoyuki Sugai(9), Keigo Shibayama(9), Toshiki Kajihara(7), Xavier Didelot(6), Yoshikazu Furuta(6), Daniel Falush(6), Masato Suzuki(6), Jukka Corander(5), Masaru Yoshida(5), Takeshi Azuma(5), Masahira Hattori(5), Ikuo Uchiyama(5)