Nicolas Rodrigue

Carleton University — Canada

Biochemistry, Genetics and Molecular Biology · Life Sciences

26h-index3.2kcitations62works1.02yr avg
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Research Topics

Genomics and Phylogenetic Studies(35), Genetic diversity and population structure(24), RNA and protein synthesis mechanisms(13), Evolution and Genetic Dynamics(12), Plant Pathogens and Fungal Diseases(8)

Publications62 total

Stochastic Character Mapping: An Under-Exploited Approach to the Study of Molecular Evolution
Journal of Molecular Evolution·2025· 1 citedOpen Access
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
Proceedings of the National Academy of Sciences·2023· 12 citedOpen Access
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Measuring the relative contribution to predictive power of modern nucleotide substitution modeling approaches
Bioinformatics Advances·2023· 3 citedOpen Access
Bayesian Cross-Validation Comparison of Amino Acid Replacement Models: Contrasting Profile Mixtures, Pairwise Exchangeabilities, and Gamma-Distributed Rates-Across-Sites
Journal of Molecular Evolution·2022· 9 citedOpen Access
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
2022· 1 citedOpen Access
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
Zenodo (CERN European Organization for Nuclear Research)·2022Open Access
Jump-Chain Simulation of Markov Substitution Processes Over Phylogenies
Journal of Molecular Evolution·2022· 1 citedOpen Access
Erratum to: A Bayesian mutation-selection framework for detecting site-specific adaptive evolution in protein-coding genes
Molecular Biology and Evolution·2021Open Access
A Bayesian Mutation–Selection Framework for Detecting Site-Specific Adaptive Evolution in Protein-Coding Genes
Molecular Biology and Evolution·2020· 19 citedOpen Access
Detecting Adaptation from Multi-species Protein-coding DNA Sequence Alignments
HAL (Le Centre pour la Communication Scientifique Directe)·2020· 1 citedOpen Access
Evolution of Carthamus species revealed through sequence analyses of the fad2 gene family
Physiology and Molecular Biology of Plants·2020· 4 citedOpen Access
Detecting amino acid preference shifts with codon-level mutation-selection mixture models
BMC Evolutionary Biology·2019· 6 citedOpen Access
A Not-So-Long Introduction to Computational Molecular Evolution
Methods in molecular biology·2019· 4 citedOpen Access
Clonal evolution and genome stability in a 2500-year-old fungal individual
Proceedings of the Royal Society B Biological Sciences·2018· 57 citedOpen Access
Conditional Approximate Bayesian Computation: A New Approach for Across-Site Dependency in High-Dimensional Mutation–Selection Models
Molecular Biology and Evolution·2018· 7 citedOpen Access
Clonal evolution and genome stability in a 2,500-year-old fungal individual
2018· 18 citedOpen Access
Multiple Factors Confounding Phylogenetic Detection of Selection on Codon Usage
Molecular Biology and Evolution·2018· 11 citedOpen Access
Table S4. PCR primers and nine sites assyaed by Sanger sequencing for Figure 3. from Clonal evolution and genome stability in a 2500-year-old fungal individual
Figshare·2018Open Access
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Frequent Co-authors

Nicolas Lartillot(19), Hervé Philippe(14), Rees Kassen(6), Jeremy R. Dettman(4), Claudia L. Kleinman(4), Yan Zhou(3), Alex Wong(3), Stéphane Aris‐Brosou(3), Jeffrey L. Thorne(3), Simon Laurin-Lemay(3), Henner Brinkmann(2), Susan F. Bailey(2), James B. Anderson(2), Johann N. Bruhn(2), Dahlia Kasimer(2), Hao Wang(2), Myron L. Smith(2), Cécile Bonnard(2), Thibault Latrille(2), Hui‐Jie Lee(2)