Tara Alpert

Genomics Institute of the Novartis Research Foundation — United States

Medicine · Health Sciences

22h-index5.6kcitations51works0.52yr avg
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Research Topics

SARS-CoV-2 and COVID-19 Research(30), SARS-CoV-2 detection and testing(25), COVID-19 Clinical Research Studies(16), Long-Term Effects of COVID-19(6), Viral gastroenteritis research and epidemiology(5)

Publications50 total

Long-read Sequencing of Nascent RNA from Budding and Fission Yeasts
2025Open Access
SACF and GILA assays on AML12 cells show limited predictive value for mouse liver genotoxicity
Toxicology and Applied Pharmacology·2025· 1 cited
Multiplex qPCR Discriminates Variants of Concern to Enhance Global Surveillance of SARS-CoV-2
2023
Method versatility in RNA extraction-free PCR detection of SARS-CoV-2 in saliva samples
Progress in Biophysics and Molecular Biology·2023· 9 citedOpen Access
Nasal host response-based screening for undiagnosed respiratory viruses: a pathogen surveillance and detection study
The Lancet Microbe·2022· 28 citedOpen Access
Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques
Genome biology·2022· 51 citedOpen Access
Gut microbiome dysbiosis in antibiotic-treated COVID-19 patients is associated with microbial translocation and bacteremia
Nature Communications·2022· 185 citedOpen Access
Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 variants Alpha and Iota
Communications Biology·2022· 21 citedOpen Access
Multiscale PHATE identifies multimodal signatures of COVID-19
Nature Biotechnology·2022· 78 citedOpen Access
Lack of association between pandemic chilblains and SARS-CoV-2 infection
Proceedings of the National Academy of Sciences·2022· 24 citedOpen Access
Sequencing SARS-CoV-2 genomes from saliva
Virus Evolution·2021· 7 citedOpen Access
Method versatility in RNA extraction-free PCR detection of SARS-CoV-2 in saliva samples
2021· 7 citedOpen Access
An outbreak of SARS‐CoV‐2 on a transplant unit in the early vaccination era
Transplant Infectious Disease·2021· 7 cited
Authors' Response to Peer Reviews of “COVID-19 Outcomes and Genomic Characterization of SARS-CoV-2 Isolated From Veterans in New England States: Retrospective Analysis”
JMIRx Med·2021Open Access
Authors' Response to Peer Reviews of “COVID-19 Outcomes and Genomic Characterization of SARS-CoV-2 Isolated From Veterans in New England States: Retrospective Analysis” (Preprint)
2021Open Access
COVID-19 Outcomes and Genomic Characterization of SARS-CoV-2 Isolated From Veterans in New England States: Retrospective Analysis
JMIRx Med·2021· 8 citedOpen Access
A stem-loop RNA RIG-I agonist protects against acute and chronic SARS-CoV-2 infection in mice
The Journal of Experimental Medicine·2021· 68 citedOpen Access
Longitudinal Immune Profiling of a Severe Acute Respiratory Syndrome Coronavirus 2 Reinfection in a Solid Organ Transplant Recipient
The Journal of Infectious Diseases·2021· 10 citedOpen Access
Impact of circulating SARS-CoV-2 variants on mRNA vaccine-induced immunity
Nature·2021· 260 citedOpen Access
Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification
2021· 37 citedOpen Access
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Frequent Co-authors

Nathan D. Grubaugh(40), Joseph R. Fauver(37), Chantal B. F. Vogels(36), Mary E. Petrone(36), Chaney C. Kalinich(28), Anderson F. Brito(24), Isabel M. Ott(23), Anne L. Wyllie(19), Mallery I. Breban(19), Albert I. Ko(17), Marie L. Landry(15), Akiko Iwasaki(14), Rebecca Earnest(13), Arnau Casanovas‐Massana(13), Anne E. Watkins(13), Shelli Farhadian(12), Anthony Muyombwe(12), Jafar Razeq(12), Randy Downing(12), Charles S. Dela Cruz(11)