Nir Yakoby

Rutgers, The State University of New Jersey — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

20h-index2.2kcitations44works0.02yr avg
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Research Topics

Developmental Biology and Gene Regulation(20), Plant Pathogens and Fungal Diseases(8), Genomics and Chromatin Dynamics(7), Plant Molecular Biology Research(6), Cellular Mechanics and Interactions(6)

Publications43 total

A computational framework to study EGFR signaling distribution in egg chambers during dynamic interactions between soma and germline
PLoS Computational Biology·2025Open Access
Diversity of Drosophila egg patterning: The missing tools to explore embryonic axis formation
Frontiers in Cell and Developmental Biology·2025Open Access
Shared <i>cis</i>-regulatory modules control expression of the tandem paralogs <i>midline</i> and <i>H15</i> in the follicular epithelium
Development·2022· 2 citedOpen Access
Nebulous without <i>white</i>: annotated long-read genome assembly and CRISPR/Cas9 genome engineering in <i>Drosophila nebulosa</i>
G3 Genes Genomes Genetics·2022· 3 citedOpen Access
Genome annotation for: Nebulous without white: annotated long-read genome assembly and CRISPR/Cas9 genome engineering in Drosophila nebulosa
Harvard Dataverse·2022Open Access
A Unifying Framework for Understanding Biological Structures and Functions Across Levels of Biological Organization
Integrative and Comparative Biology·2021· 10 citedOpen Access
Quantitative analyses of EGFR localization and trafficking dynamics in the follicular epithelium
Development·2020· 14 citedOpen Access
The ETS-transcription factor Pointed is sufficient to regulate the posterior fate of the follicular epithelium
Development·2020· 5 citedOpen Access
<i>In locus</i>analysis of patterning evolution in the BMPR2 Wishful thinking
Development·2018· 3 citedOpen Access
Simple Expression Domains Are Regulated by Discrete CRMs During <i>Drosophila</i> Oogenesis
G3 Genes Genomes Genetics·2017· 8 citedOpen Access
Gene regulation during <i>Drosophila</i> eggshell patterning
Proceedings of the National Academy of Sciences·2017· 20 citedOpen Access
Control of reaction-diffusion equations on time-evolving manifolds
2016Open Access
Evolutionary changes in TGFα distribution underlie morphological diversity in eggshells from <i>Drosophila</i> species
Development·2014· 12 citedOpen Access
Chorion Patterning: A Window into Gene Regulation and Drosophila Species’ Relatedness
Molecular Biology and Evolution·2013· 22 citedOpen Access
The Drosophila BMPRII, wishful thinking, is required for eggshell patterning
Developmental Biology·2012· 24 cited
Evolution of BMP Signaling in Drosophila Oogenesis: A Receptor-Based Mechanism
Biophysical Journal·2012· 16 citedOpen Access
Using <i>Drosophila</i> as a model system to study cold tolerance
The FASEB Journal·2012
Pattern formation by a moving morphogen source
Physical Biology·2011· 29 cited
BMP signaling dynamics in the follicle cells of multiple Drosophila species
Developmental Biology·2011· 24 cited
Pattern formation by dynamically interacting network motifs
Proceedings of the National Academy of Sciences·2009· 39 citedOpen Access
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Frequent Co-authors

Stanislav Y. Shvartsman(13), Dov Prusky(8), A. Dinoor(6), Matthew G. Niepielko(6), Nicole T. Revaitis(6), Jeremiah J. Zartman(5), Robert A. Marmion(5), Ilya Raskin(4), Ilana Kobiler(4), Jessica Lembong(4), Trudi Schüpbach(4), D. Beno-Moualem(3), Christopher A. Bristow(3), Jitendra Kanodia(3), Benedetto Piccoli(3), Slavko Komarnytsky(2), Nikolai Borisjuk(2), Noel T. Keen(2), Alison Garvey(2), Xenia Schafer(2)