Ben Warne

University of Cambridge — United Kingdom

Medicine · Health Sciences

27h-index7.0kcitations79works3.02yr avg
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Research Topics

SARS-CoV-2 and COVID-19 Research(35), SARS-CoV-2 detection and testing(21), COVID-19 Clinical Research Studies(20), COVID-19 epidemiological studies(18), Antibiotic Resistance in Bacteria(8)

Publications67 total

Variable rates of SARS-CoV-2 evolution in chronic infections
PLoS Pathogens·2025· 3 citedOpen Access
The NOSTRA model: Coherent estimation of infection sources in the case of possible nosocomial transmission
PLoS Computational Biology·2025Open Access
Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae
Microbial Genomics·2024· 13 citedOpen Access
Variable rates of SARS-CoV-2 evolution in chronic infections
2024· 1 citedOpen Access
Diversity, functional classification and genotyping of SHV β-lactamases in <i>Klebsiella pneumoniae</i>
2024· 1 citedOpen Access
The NOSTRA model: coherent estimation of infection sources in the case of possible nosocomial transmission
arXiv (Cornell University)·2024Open Access
A Simulation Model and Dashboard for Predicting Covid-19 Bed Requirements
2023· 1 cited
The clinical, genomic, and microbiological profile of invasive multi-drug resistant Escherichia coli in a major teaching hospital in the United Kingdom
Microbial Genomics·2023· 2 citedOpen Access
Long-read sequencing reveals genomic diversity and associated plasmid movement of carbapenemase-producing bacteria in a UK hospital over 6 years
Microbial Genomics·2023· 22 citedOpen Access
The clinical, genomic, and microbiological profile of invasive multi-drug resistant Escherichia coli in a major teaching hospital in the United Kingdom
2023Open Access
Oseltamivir is protective for in-patient mortality in PCR confirmed influenza B and influenza A(H3N2) infections in an historic cohort of 1,048 patients hospitalised during the 2016-17 and 2017-18  influenza seasons
Journal of Infection·2023· 4 cited
Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway
Nature Microbiology·2022· 24 citedOpen Access
A prospective study of risk factors associated with seroprevalence of SARS-CoV-2 antibodies in healthcare workers at a large UK teaching hospital
Journal of Infection·2022· 16 citedOpen Access
SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway
Nature Microbiology·2022· 702 citedOpen Access
Investigation of healthcare-associated SARS-CoV-2 infection: Learning outcomes from an investigative process in the initial phase of the pandemic
Journal of Infection Prevention·2022· 1 citedOpen Access
Multivariate profile and acute-phase correlates of cognitive deficits in a COVID-19 hospitalised cohort
EClinicalMedicine·2022· 115 citedOpen Access
Genomic assessment of quarantine measures to prevent SARS-CoV-2 importation and transmission
Nature Communications·2022· 17 citedOpen Access
Long read sequencing reveals genomic diversity and associated plasmid movement of carbapenemase-producing bacteria in a UK hospital over six years.
2022Open Access
Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission
Nature Communications·2022· 49 citedOpen Access
A2B-COVID: A Tool for Rapidly Evaluating Potential SARS-CoV-2 Transmission Events
Molecular Biology and Evolution·2022· 20 citedOpen Access
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Frequent Co-authors

M. Estée Török(24), Ian Goodfellow(21), Myra Hosmillo(18), Aminu S. Jahun(18), Fahad Khokhar(17), William L. Hamilton(17), Michael P. Weekes(17), Dominic Sparkes(16), Matthew Routledge(16), Nick K Jones(16), Nicholas M. Brown(15), Stephen Baker(15), Lucy Rivett(14), Grant Hall(14), Sarah Caddy(13), Martin D. Curran(13), Sharon J. Peacock(13), Sushmita Sridhar(12), Laura Caller(12), Theresa Feltwell(12)