Raphael Trevizani

La Jolla Institute for Immunology — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

7h-index347citations18works22.32yr avg
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Research Topics

vaccines and immunoinformatics approaches(9), Monoclonal and Polyclonal Antibodies Research(3), Genomics and Phylogenetic Studies(2), SARS-CoV-2 and COVID-19 Research(2), Immunotherapy and Immune Responses(2)

Publications18 total

Peptide-driven identification of TCRs reveals dynamics and phenotypes of CD4 T cells in tuberculosis
The Journal of Immunology·2025Open Access
Highly conserved Betacoronavirus sequences are broadly recognized by human T cells
Cell·2025· 5 citedOpen Access
Peptide Driven Identification of TCRs (PDI-TCR) reveals dynamics and phenotypes of CD4 T cells in tuberculosis
2025Open Access
Putting computational models of immunity to the test—An invited challenge to predict B.pertussis vaccination responses
PLoS Computational Biology·2025· 1 citedOpen Access
PAPreC: A Pipeline for Antigenicity Prediction Comparison Methods across Bacteria
ACS Omega·2025· 3 citedOpen Access
Putting computational models of immunity to the test - an invited challenge to predict <i>B. pertussis</i> vaccination outcomes
2024Open Access
The receiver operating characteristic curve accurately assesses imbalanced datasets
Patterns·2024· 127 citedOpen Access
Next-generation IEDB tools: a platform for epitope prediction and analysis
Nucleic Acids Research·2024· 42 citedOpen Access
PAPreC: A Comprehensive Pipeline for Comparing Antigenicity Prediction and Assessing Factors Influencing Predictive Performance
SSRN Electronic Journal·2023Open Access
The ROC-AUC Accurately Assesses Imbalanced Datasets
SSRN Electronic Journal·2023· 4 citedOpen Access
A comprehensive analysis of the IEDB MHC class-I automated benchmark
Briefings in Bioinformatics·2022· 8 citedOpen Access
Deepitope: Prediction of HLA-independent T-cell epitopes mediated by MHC class II using a convolutional neural network
Artificial Intelligence in the Life Sciences·2022· 5 citedOpen Access
Engineering of single-domain antibodies for next-generation snakebite antivenoms
International Journal of Biological Macromolecules·2021· 20 cited
Circumventing the side effects of L-asparaginase
Biomedicine & Pharmacotherapy·2021· 93 citedOpen Access
Supersecondary Structures and Fragment Libraries
Methods in molecular biology·2019
Genetic algorithm for deimmunization of Escherichia coli L-asparaginase
Anais do IV International Symposium on Immunobiological e VII Seminário Anual Científico e Tecnológico de Bio-Manguinhos·2019Open Access
Critical Features of Fragment Libraries for Protein Structure Prediction
PLoS ONE·2017· 22 citedOpen Access
Antinociceptive activity of the essential oil and fractions of pterodon emarginatus vogel seeds
El Servicio de Difusión de la Creación Intelectual (National University of La Plata)·2008· 17 citedOpen Access

Frequent Co-authors

Jason Greenbaum(8), Bjoern Peters(7), Eve Richardson(5), Alessandro Sette(5), Fábio Lima Custódio(5), Morten Nielsen(4), Julie G. Burel(4), Rashmi Tippalagama(4), Brendan Ha(3), Marcus Fabiano de Almeida Mendes(3), Jarjapu Mahita(3), Hannah Carter(2), Marcela Helena Gambim Fonseca(2), Yasmmin Martins(2), Maiana de Oliveira Cerqueira e Costa(2), Miranda Clara Palumbo(2), Marisa Nicolás(2), Pramod Shinde(2), Lisa Willemsen(2), Michael C. Anderson(2)