Sudip Sharma

Temple University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

7h-index1.2kcitations30works90.82yr avg
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Research Topics

Genomics and Phylogenetic Studies(16), Genetic diversity and population structure(7), Chromosomal and Genetic Variations(5), Algorithms and Data Compression(4), Genetic Mapping and Diversity in Plants and Animals(4)

Publications30 total

Robust and Efficient Confidence Limits for Phylogenomic Inference of Organismal Relationships
Molecular Biology and Evolution·2025Open Access
MyESL: A Software for Evolutionary Sparse Learning in Molecular Phylogenetics and Genomics
Molecular Biology and Evolution·2025· 2 citedOpen Access
Evolutionary sparse learning reveals the shared genetic basis of convergent traits
Nature Communications·2025· 7 citedOpen Access
R3F: An R package for evolutionary dates, rates, and priors using the relative rate framework.
PubMed·2025Open Access
MyESL: Sparse learning in molecular evolution and phylogenetic analysis
PubMed·2025Open Access
Evolutionary sparse learning with paired species contrast reveals the shared genetic basis of convergent traits
2025Open Access
MEGA12: Molecular Evolutionary Genetic Analysis version 12 for adaptive and green computing
2024· 12 citedOpen Access
MEGA12: Molecular Evolutionary Genetic Analysis Version 12 for Adaptive and Green Computing
Molecular Biology and Evolution·2024· 967 citedOpen Access
Discovering Fragile Clades and Causal Sequences in Phylogenomics by Evolutionary Sparse Learning
Molecular Biology and Evolution·2024· 11 citedOpen Access
Discovering Fragile Clades And Causal Sequences In Phylogenomics By Evolutionary Sparse Learning
2024Open Access
Covid-19 vaccine compliance among residents of Kathmandu Valley
International Journal of Public Health Asia Pacific (IJPHAP)·2024Open Access
Methods for Estimating Personal Disease Risk and Phylogenetic Diversity of Hematopoietic Stem Cells
Molecular Biology and Evolution·2023· 1 citedOpen Access
Molecular timetrees using relaxed clocks and uncertain phylogenies
Frontiers in Bioinformatics·2023· 4 citedOpen Access
The association of low birthweight and prematurity on outcomes in children and adults with nephrotic syndrome—a NEPTUNE cohort study
Pediatric Nephrology·2023· 5 citedOpen Access
Molecular timetrees using relaxed clocks and uncertain phylogenies
Figshare·2023Open Access
Taming the Selection of Optimal Substitution Models in Phylogenomics by Site Subsampling and Upsampling
Molecular Biology and Evolution·2022· 4 citedOpen Access
Taming the selection of optimal substitution models in Phylogenomics
Figshare·2022Open Access
Empirical datasets
Figshare·2022Open Access
Fast and accurate bootstrap confidence limits on genome-scale phylogenies using little bootstraps
Nature Computational Science·2021· 27 citedOpen Access
Evolutionary Sparse Learning for Phylogenomics
Molecular Biology and Evolution·2021· 22 citedOpen Access
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Frequent Co-authors

Sudhir Kumar(25), Maxwell Sanderford(8), Koichiro Tamura(5), Glen Stecher(4), Michael Suleski(3), Qiqing Tao(3), Sayaka Miura(3), Glenn S. Gerhard(3), Steven Weaver(2), Marcos A. Caraballo‐Ortiz(2), Sergei L. Kosakovsky Pond(2), John B. Allard(2), Ravi Patel(2), Slobodan Vučetić(2), Sangeeta Hingorani(2), Debbie S. Gipson(2), Tarak Srivastava(2), Jose Barba‐Montoya(2), Jun Liu(2), Jieping Ye(2)