Nelle Varoquaux

Institut polytechnique de Grenoble — France

Biochemistry, Genetics and Molecular Biology · Life Sciences

21h-index4.8kcitations106works1.82yr avg
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Research Topics

Genomics and Chromatin Dynamics(14), Genomics and Phylogenetic Studies(12), Gene expression and cancer classification(7), Scientific Computing and Data Management(7), Biomedical and Engineering Education(7)

Publications106 total

Multi‐season analysis reveals hundreds of drought‐responsive genes in sorghum
The Plant Journal·2026Open Access
Computo - A Journal for Transparent and Reproducible Research in Statistics and Machine Learning
2025Open Access
Computo - A Journal for Transparent and Reproducible Research in Statistics and Machine Learning
2025Open Access
Global distribution of isoprenoid quinones across Bacteria
2025Open Access
DNA methylation and immune infiltration mediate the impact of tobacco exposure on pancreatic adenocarcinoma outcome: a high-dimensional mediation analysis
2025Open Access
Simulation-based inference of yeast centromeres
arXiv (Cornell University)·2025Open Access
Multi-season analysis reveals hundreds of drought-responsive genes in sorghum
2025· 1 citedOpen Access
Holo‐omics disentangle drought response and biotic interactions among plant, endophyte and pathogen
New Phytologist·2025· 3 citedOpen Access
Penalized likelihood optimization for censored missing value imputation in proteomics
Biostatistics·2025· 1 citedOpen Access
Dynamic quinone repertoire accompanied the diversification of energy metabolism in <i>Pseudomonadota</i>
The ISME Journal·2024· 13 citedOpen Access
Stable chromosome configuration and loop-based polarization in animal symbionts
2023Open Access
Penalized likelihood optimization for censored missing value imputation in proteomics
2023· 3 citedOpen Access
Diversification of Ubiquinone Biosynthesis via Gene Duplications, Transfers, Losses, and Parallel Evolution
Molecular Biology and Evolution·2023· 12 citedOpen Access
Inference of 3D genome architecture by modeling overdispersion of Hi-C data
Bioinformatics·2023· 16 citedOpen Access
Biosynthesis and Physiology of Ubiquinone under anaerobic conditions
Biochimica et Biophysica Acta (BBA) - Bioenergetics·2022
Evolutionary scenario of substrate regio-selectivity for hydroxylases involved in ubiquinone production
Biochimica et Biophysica Acta (BBA) - Bioenergetics·2022
Anaerobic ubiquinone biosynthetic pathway in Escherichia coli
Biochimica et Biophysica Acta (BBA) - Bioenergetics·2022
Community, Time, and (Con)text: A Dynamical Systems Analysis of Online Communication and Community Health among Open‐Source Software Communities
Cognitive Science·2022· 6 citedOpen Access
Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression
Molecular Ecology·2022· 33 citedOpen Access
Cell Wall Compositions of Sorghum bicolor Leaves and Roots Remain Relatively Constant Under Drought Conditions
Frontiers in Plant Science·2021· 17 citedOpen Access
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Frequent Co-authors

Thomas A Caswell(19), Michael Droettboom(19), Eric Firing(19), Jens Hedegaard Nielsen(19), Benjamin Root(19), Ryan May(19), Phil Elson(19), Jouni K. Seppänen(19), Darren Dale(19), Damon McDougall(19), Andrew Straw(19), Paul Hobson(19), Tony S Yu(19), Antony Lee(18), Elliott Sales de Andrade(18), Eric Ma(18), Adrien F. Vincent(18), Tim Hoffmann(17), David Stansby(17), Jody Klymak(17)