Nikolay S. Markov

Northwestern University — United States

Medicine · Health Sciences

18h-index5.2kcitations75works3.42yr avg
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Research Topics

Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis(10), Pneumonia and Respiratory Infections(9), COVID-19 Clinical Research Studies(7), SARS-CoV-2 and COVID-19 Research(7), Single-cell and spatial transcriptomics(7)

Publications74 total

Transitions in lung microbiota landscape associate with distinct patterns of pneumonia progression
Cell Host & Microbe·2025
Development of a Pilot Machine Learning Model to Predict Successful Short-Term Treatment Success in Critically Ill Patients With Community-Acquired Pneumonia
CHEST Critical Care·2025Open Access
Imaging-Based Mortality Prediction in Patients with Systemic Sclerosis
Lecture notes in computer science·2025Open Access
MACHINE LEARNING FOR EARLY PREDICTION OF HOSPITAL-ACQUIRED PNEUMONIA TREATMENT OUTCOMES IN CRITICALLY ILL PATIENTS
CHEST Journal·2025
Profibrotic monocyte-derived alveolar macrophages as a biomarker and therapeutic target in systemic sclerosis-associated interstitial lung disease
2025· 1 citedOpen Access
Large language models accurately identify immunosuppression in intensive care unit patients
Journal of the American Medical Informatics Association·2025· 1 citedOpen Access
Developing and validating machine learning models to predict next-day extubation
Scientific Reports·2025· 2 citedOpen Access
Development of a pilot machine learning model to predict successful cure in critically ill patients with community-acquired pneumonia
2025Open Access
Defining and benchmarking open problems in single-cell analysis
Nature Biotechnology·2025· 17 citedOpen Access
Machine Learning Analysis of Electronic Health Records Identifies Interstitial Lung Disease and Predicts Mortality in Patients with Systemic Sclerosis
2025Open Access
POS0251 PROFIBROTIC MONOCYTE-DERIVED ALVEOLAR MACROPHAGES ARE ASSOCIATED WITH DISEASE SEVERITY IN PATIENTS WITH SYSTEMIC SCLEROSIS-ASSOCIATED INTERSTITIAL LUNG DISEASE
Annals of the Rheumatic Diseases·2025Open Access
Antibiotic de-escalation patterns and outcomes in critically ill patients with suspected pneumonia as informed by bronchoalveolar lavage results
European Journal of Clinical Microbiology & Infectious Diseases·2025· 7 citedOpen Access
Profibrotic Monocyte-Derived Alveolar Macrophages Are Associated With Disease Severity in Patients With Systemic Sclerosis-Associated Interstitial Lung Disease
American Journal of Respiratory and Critical Care Medicine·2025
The Epidemiology of Intensive Care Unit Readmissions Across 8 Academic Medical Centers
American Journal of Respiratory and Critical Care Medicine·2025
Machine Learning to Predict the Onset of Ventilator-associated Pneumonia Using Electronic Health Record Data
American Journal of Respiratory and Critical Care Medicine·2025· 1 cited
Machine Learning Predicts Mortality in Patients With Systemic Sclerosis-Associated Interstitial Lung Disease From Electronic Health Record Data
American Journal of Respiratory and Critical Care Medicine·2025
funkyheatmap: Visualising data frames with mixed data types
The Journal of Open Source Software·2025Open Access
An Observational Cohort Study of Bronchoalveolar Lavage Fluid Galactomannan and <i>Aspergillus</i> Culture Positivity in Patients Requiring Mechanical Ventilation
Open Forum Infectious Diseases·2025Open Access
Author Correction: Profibrotic monocyte-derived alveolar macrophages are expanded in patients with persistent respiratory symptoms and radiographic abnormalities after COVID-19
Nature Immunology·2025· 1 citedOpen Access
<i>In silico</i> perturbations provide multivariate interpretability in predicting post-lung transplant outcomes
2024· 2 citedOpen Access
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Frequent Co-authors

Alexander V. Misharin(34), G. R. Scott Budinger(30), Hiam Abdala‐Valencia(22), Catherine A. Gao(20), Benjamin D. Singer(19), Mengjia Kang(18), Richard G. Wunderink(18), Ziyan Lu(16), Anna Pawlowski(16), Yuliya Politanska(15), Rogan A. Grant(14), Ankit Bharat(14), Luke V. Rasmussen(14), Helen K. Donnelly(12), Chiagozie I. Pickens(12), Manu Jain(12), Prasanth Nannapaneni(11), Luisa Morales‐Nebreda(10), Lango Sichizya(10), James M. Walter(10)