Nathan Mih

University of California San Diego — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

18h-index2.8kcitations38works1.52yr avg
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Research Topics

Microbial Metabolic Engineering and Bioproduction(17), Protein Structure and Dynamics(13), RNA and protein synthesis mechanisms(12), Bacterial Genetics and Biotechnology(9), Bioinformatics and Genomic Networks(7)

Publications38 total

Establishing comprehensive quaternary structural proteomes from genome sequence
2024· 2 citedOpen Access
Establishing comprehensive quaternary structural proteomes from genome sequence
2024Open Access
Protein structure, a genetic constraint on glycosylation
2024· 2 citedOpen Access
Establishing comprehensive quaternary structural proteomes from genome sequence
2024· 2 citedOpen Access
Establishing comprehensive quaternary structural proteomes from genome sequence
Research Square (Research Square)·2023· 2 citedOpen Access
Genome‐scale metabolic modeling reveals key features of a minimal gene set
Molecular Systems Biology·2021· 23 citedOpen Access
Bacterial fitness landscapes stratify based on proteome allocation associated with discrete aero-types
PLoS Computational Biology·2021· 18 citedOpen Access
Adaptations of Escherichia coli strains to oxidative stress are reflected in properties of their structural proteomes
BMC Bioinformatics·2020· 13 citedOpen Access
Additional file 1 of Adaptations of Escherichia coli strains to oxidative stress are reflected in properties of their structural proteomes
Figshare·2020Open Access
Structure of galactarate dehydratase, a new fold in an enolase involved in bacterial fitness after antibiotic treatment
Protein Science·2019· 5 citedOpen Access
Expanding the uses of genome‐scale models with protein structures
Molecular Systems Biology·2019· 13 citedOpen Access
Cellular responses to reactive oxygen species are predicted from molecular mechanisms
Proceedings of the National Academy of Sciences·2019· 125 citedOpen Access
A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types
PLoS Computational Biology·2019· 61 citedOpen Access
Mechanisms for Benzene Dissociation through the Excited State of T4 Lysozyme L99A Mutant
Biophysical Journal·2018· 26 citedOpen Access
Machine learning applied to enzyme turnover numbers reveals protein structural correlates and improves metabolic models
Nature Communications·2018· 239 citedOpen Access
Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance
Nature Communications·2018· 182 citedOpen Access
Systematic discovery of uncharacterized transcription factors in <i>Escherichia coli</i> K-12 MG1655
Nucleic Acids Research·2018· 114 citedOpen Access
Systematic discovery of uncharacterized transcription factors in <i>Escherichia coli</i> K-12 MG1655
2018· 1 citedOpen Access
Escherichia coli B2 strains prevalent in inflammatory bowel disease patients have distinct metabolic capabilities that enable colonization of intestinal mucosa
BMC Systems Biology·2018· 50 citedOpen Access
The Staphylococcus aureus Two-Component System AgrAC Displays Four Distinct Genomic Arrangements That Delineate Genomic Virulence Factor Signatures
Frontiers in Microbiology·2018· 37 citedOpen Access
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Frequent Co-authors

Bernhard Ø. Palsson(33), Jonathan M. Monk(18), Anand V. Sastry(10), Laurence Yang(10), Edward Catoiu(9), James T. Yurkovich(9), Elizabeth Brunk(8), Colton J. Lloyd(7), David Heckmann(7), Erol Kavvas(7), Ye Gao(7), Xin Fang(7), Adam M. Feist(5), Jared T. Broddrick(5), Donghyuk Kim(5), Ke Chen(5), Yara Seif(4), Amitesh Anand(4), Justin Tan(4), Sang Woo Seo(4)