H. Bradley Shaffer

University of Connecticut — United States

Environmental Science · Physical Sciences

73h-index15.4kcitations317works1.42yr avg
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Research Topics

Amphibian and Reptile Biology(149), Genetic diversity and population structure(101), Turtle Biology and Conservation(64), Genomics and Phylogenetic Studies(52), Species Distribution and Climate Change(44)

Publications316 total

Genome Assembly for the Sierra Nevada Parnassian ( <i>Parnassius behrii</i> ) and a Brief Review of Butterfly Genome Sizes
Journal of Heredity·2025Open Access
“A genome assembly of the California flannelbush, <i>Fremontodendron californicum</i> ”
Journal of Heredity·2025Open Access
A genome assembly of Douglas’ meadowfoam, <i>Limnanthes douglasii</i> R. BR.
Journal of Heredity·2025Open Access
Matrix Stiffness Directs Early Injury and Ketogenesis Programs to Prime Kidney Repair
Journal of the American Society of Nephrology·2025
Reassessing Hybrid Vigor or Hybrid Dysfunction Using Physiological Trade-Offs in an Endangered Salamander System
Ecological and Evolutionary Physiology·2025
A chromosome level genome assembly of the marine flowering plant, Torrey’s surfgrass ( <i>Phyllospadix Torreyi</i> ) reveals an exceptionally large Y-chromosome
Journal of Heredity·2025
A chromosome-level genome assembly of a vernal pool specialist amphibian, the Western Spadefoot, Spea hammondii
2025
A genome assembly of Greene’s tuctoria, <i>Tuctoria greenei</i> , an amphibious endemic and endangered California vernal pool grass
Journal of Heredity·2025Open Access
Genome assembly and annotation of a deep-diving pinniped, the northern elephant seal ( <i>Mirounga angustirostris</i> )
Journal of Heredity·2025Open Access
A reference genome for Colusa grass, <i>Neostapfia colusana</i> , a threatened and endangered California vernal pool plant
Journal of Heredity·2025· 1 citedOpen Access
Building genomically‐informed demographic models to guide management of invasive hybrids
Ecological Applications·2025Open Access
A genome assembly of the California poppy, <i>Eschscholzia californica</i>
Journal of Heredity·2025Open Access
Population Genomics, Local Adaptation and Cryptic Speciation in a Temperate Reef Fish, the Black Surfperch, <i>Embiotoca jacksoni</i> , Using Genome‐Wide Resequencing
Molecular Ecology·2025Open Access
<scp>NewtCap</scp> : An Efficient Target Capture Approach to Boost Genomic Studies in Salamandridae (True Salamanders and Newts)
Ecology and Evolution·2025· 2 citedOpen Access
Genome resources—A chromosome-level genome assembly for the long-nosed leopard lizard, <i>Gambelia wislizenii</i> , the first reference genome for the lizard family Crotaphytidae
Journal of Heredity·2025Open Access
Turtles of the World: Annotated Checklist and Atlas of Taxonomy, Synonymy, Distribution, and Conservation Status (10th Ed.)
Chelonian research monographs·2025· 2 citedOpen Access
Chytrid fungal infections in alpine toads proliferate during winter dormancy
2025Open Access
A chromosome-level reference genome assembly for Gilbert’s skink <i>Plestiodon gilberti</i>
Journal of Heredity·2025· 1 citedOpen Access
A near chromosome-level assembly of the serpentine endemic columbine, <i>Aquilegia eximia</i>
Journal of Heredity·2025Open Access
A chromosome-level genome assembly of the beavertail cactus, <i>Opuntia basilaris</i>
Journal of Heredity·2025· 1 cited
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Frequent Co-authors

John B. Iverson(5), Phillip Q. Spinks(5), S. Randal Voss(5), Carlos Davidson(4), Anders G. J. Rhodin(4), Robert C. Thomson(4), Benjamin M. Fitzpatrick(4), Peter Paul van Dijk(3), Uwe Fritz(3), Arthur Georges(3), Fredric J. Janzen(3), Ian Wang(3), Peter C. Trenham(3), Robert N. Fisher(2), Scott V. Edwards(2), Mark R. Jennings(2), Craig B. Stanford(2), Russell A. Mittermeier(2), Gerald Kuchling(2), Kristin H. Berry(2)