Adrian Viehweger

University Hospital Leipzig — Germany

Biochemistry, Genetics and Molecular Biology · Life Sciences

15h-index1.1kcitations52works9.32yr avg
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Research Topics

Genomics and Phylogenetic Studies(19), Bacteriophages and microbial interactions(12), Microbial Metabolic Engineering and Bioproduction(5), Microbial Community Ecology and Physiology(5), Gut microbiota and health(4)

Publications52 total

Targeted decontamination of sequencing data with CLEAN
NAR Genomics and Bioinformatics·2025· 3 citedOpen Access
LLM Robustness Against Misinformation in Biomedical Question Answering
arXiv (Cornell University)·2024Open Access
Accurate bacterial outbreak tracing with Oxford Nanopore sequencing and reduction of methylation-induced errors
Genome Research·2024· 22 citedOpen Access
A practice-based approach to teaching antimicrobial therapy using artificial intelligence and gamified learning
JAC-Antimicrobial Resistance·2024· 12 citedOpen Access
Accurate bacterial outbreak tracing with Oxford Nanopore sequencing and reduction of methylation-induced errors
2023· 7 citedOpen Access
Targeted decontamination of sequencing data with CLEAN
2023· 6 citedOpen Access
Enhanced glycerol assimilation and lipid production in Rhodotorula toruloides CBS14 upon addition of hemicellulose primarily correlates with early transcription of energy-metabolism-related genes
Biotechnology for Biofuels and Bioproducts·2023· 2 citedOpen Access
Nanopore-based enrichment of antimicrobial resistance genes – a case-based study
Gigabyte·2023· 13 citedOpen Access
Managing and monitoring a pandemic: showcasing a practical approach for the genomic surveillance of SARS-CoV-2
Database·2023· 5 citedOpen Access
Faltwerk: a library for spatial exploratory data analysis of protein structures
Bioinformatics Advances·2023Open Access
Enhanced glycerol assimilation and lipid production in Rhodotorula toruloides CBS14 upon addition of hemicellulose primarily correlates with early transcription of energy-metabolism related genes
Research Square (Research Square)·2022Open Access
MICNet: Prediction of antibiotic susceptibility from microscopic images using transfer learning
2022Open Access
Leclercia pneumoniae sp. nov., a bacterium isolated from clinical specimen in Leipzig, Germany
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY·2022· 7 cited
Near Chromosome-Level Genome Assembly and Annotation of Rhodotorula babjevae Strains Reveals High Intraspecific Divergence
Journal of Fungi·2022· 6 citedOpen Access
Evaluation of microbiome enrichment and host DNA depletion in human vaginal samples using Oxford Nanopore’s adaptive sequencing
Scientific Reports·2022· 80 citedOpen Access
What the Phage: a scalable workflow for the identification and analysis of phage sequences
GigaScience·2022· 38 citedOpen Access
Context-aware genomic surveillance reveals hidden transmission of a carbapenemase-producing Klebsiella pneumoniae
Microbial Genomics·2021· 13 citedOpen Access
Near Chromosome-Level Genome Assembly and Annotation of <i>Rhodotorula babjevae</i> Strains Reveals High Intraspecific Divergence
Preprints.org·2021· 1 citedOpen Access
Chromosome-level genome assembly and transcriptome-based annotation of the oleaginous yeast Rhodotorula toruloides CBS 14
Genomics·2021· 16 citedOpen Access
DarkQ: continuous genomic monitoring using message queues
F1000Research·2021· 1 citedOpen Access
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Frequent Co-authors

Christian Brandt(28), Martin Hölzer(23), Mathias W. Pletz(13), Mike Marquet(10), Bettina Müller(9), W. Hirsch(6), Ralf Ehricht(6), Giselle C. Martín‐Hernández(6), Volkmar Passoth(6), Oliwia Makarewicz(5), Sebastian Krautwurst(4), Manja Marz(4), Ina Sorge(4), Mara Lohde(4), Brigitte König(4), Mikołaj Chmielarz(4), Antonio Heras‐Garvin(3), Victoria Navarro(3), Marisa Vizuete(3), Alberto Serrano‐Pozo(3)