Patrick Tschopp

University of Basel — Switzerland

Biochemistry, Genetics and Molecular Biology · Life Sciences

18h-index1.4kcitations42works6.32yr avg
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Research Topics

Developmental Biology and Gene Regulation(20), Congenital heart defects research(12), RNA Research and Splicing(10), Genomics and Chromatin Dynamics(9), Single-cell and spatial transcriptomics(8)

Publications42 total

Developmental genetic basis of dorsal spine reduction in acidic-adapted threespine stickleback fish
2025Open Access
Transcriptional and cellular maturation of the chick spinal cord in the context of distinct neuromuscular circuits
2025Open Access
Metagenomic Insights Into the Dietary Diversity of the Adaptive Radiation of Cichlid Fishes in Lake Tanganyika
Molecular Ecology·2025· 1 citedOpen Access
Distinct gene regulatory dynamics drive skeletogenic cell fate convergence during vertebrate embryogenesis
Nature Communications·2025· 2 citedOpen Access
Adaptive cellular evolution in the intestinal tracts of hyperdiverse African cichlid fishes
2024· 3 citedOpen Access
The genetics of niche-specific behavioral tendencies in an adaptive radiation of cichlid fishes
Science·2024· 22 cited
Distinct Gene Regulatory Dynamics Drive Skeletogenic Cell Fate Convergence During Vertebrate Embryogenesis
2024· 4 citedOpen Access
Direct reprogramming of non-limb fibroblasts to cells with properties of limb progenitors
Developmental Cell·2024· 8 citedOpen Access
Self-organized BMP signaling dynamics underlie the development and evolution of digit segmentation patterns in birds and mammals
Proceedings of the National Academy of Sciences·2024· 17 citedOpen Access
Distinct patterning responses of wing and leg neuromuscular systems to different preaxial polydactylies
Frontiers in Cell and Developmental Biology·2023· 1 citedOpen Access
Self-organized BMP signaling dynamics underlie the development and evolution of tetrapod digit patterns
2023· 1 citedOpen Access
A method to investigate muscle target‐specific transcriptional signatures of single motor neurons
Developmental Dynamics·2022· 4 citedOpen Access
Direct Reprogramming of Non-limb Fibroblasts to Cells with Properties of Limb Progenitors
2021· 3 citedOpen Access
Assessing evolutionary and developmental transcriptome dynamics in homologous cell types
Developmental Dynamics·2021· 53 citedOpen Access
Extracellular matrix gene expression signatures as cell type and cell state identifiers
Matrix Biology Plus·2021· 23 citedOpen Access
Extracellular matrix gene expression signatures as cell type and cell state identifiers
2021· 1 citedOpen Access
Assessing evolutionary and developmental transcriptome dynamics in homologous cell types
2021· 12 citedOpen Access
A sense of place, many times over ‐ pattern formation and evolution of repetitive morphological structures
Developmental Dynamics·2019· 8 citedOpen Access
Development of the chick wing and leg neuromuscular systems and their plasticity in response to changes in digit numbers
Developmental Biology·2019· 15 cited
The constrained architecture of mammalian <i>Hox</i> gene clusters
Proceedings of the National Academy of Sciences·2019· 48 citedOpen Access
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Frequent Co-authors

Denis Duboule(10), Christian Feregrino(10), Antoine Fages(8), Fabio Sacher(7), Maëva Luxey(7), Clifford J. Tabin(5), Sabrina Fischer(5), József Zákány(4), Bianka Berki(4), Anna C. Groner(3), Olivier Pourquié(3), Tom W. Hiscock(3), Fabrice Darbellay(3), Fabrizia Ronco(3), Walter Salzburger(3), Emmanuelle Grall(3), Oren Parnas(2), Célia Bochaton(2), Lucille Lopez‐Delisle(2), Bénédicte Mascrez(2)