Yohei Sasagawa

Hokkaido University — Japan

Biochemistry, Genetics and Molecular Biology · Life Sciences

22h-index2.6kcitations57works0.02yr avg
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Research Topics

Single-cell and spatial transcriptomics(22), Genetics, Aging, and Longevity in Model Organisms(17), CRISPR and Genetic Engineering(7), Spaceflight effects on biology(6), DNA Repair Mechanisms(5)

Publications57 total

MitoDelta: identifying mitochondrial DNA deletions at cell-type resolution from single-cell RNA sequencing data
BMC Genomics·2025Open Access
Elucidation of the mechanism of byproduct DNA synthesis in whole-transcript amplification by poly-A tagging and development of its specific suppression
2025Open Access
Evaluation of Transport Activity Using Mouse Jejunal Epithelial Cell Monolayer Culture System
Biological and Pharmaceutical Bulletin·2025Open Access
MitoDelta: identifying mitochondrial DNA deletions at cell-type resolution from single-cell RNA sequencing data
2025Open Access
Author Correction: Single-cell transcriptomics uncovers EGFR signaling-mediated gastric progenitor cell differentiation in stomach homeostasis
Nature Communications·2023Open Access
Distinctiveness and continuity in transcriptome and connectivity in the anterior-posterior axis of the paraventricular nucleus of the thalamus
Cell Reports·2023· 30 citedOpen Access
WUSCHEL-RELATED HOMEOBOX 13 suppresses de novo shoot regeneration via cell fate control of pluripotent callus
Science Advances·2023· 63 citedOpen Access
Single-cell transcriptomics uncovers EGFR signaling-mediated gastric progenitor cell differentiation in stomach homeostasis
Nature Communications·2023· 28 citedOpen Access
A common epigenetic mechanism across different cellular origins underlies systemic immune dysregulation in an idiopathic autism mouse model
Molecular Psychiatry·2022· 19 cited
Distinctiveness and continuity in transcriptome and connectivity in the anterior-posterior axis of the paraventricular nucleus of thalamus
2022· 2 citedOpen Access
Local states of chromatin compaction at transcription start sites control transcription levels
Nucleic Acids Research·2021· 30 citedOpen Access
Developmental excitation-inhibition imbalance underlying psychoses revealed by single-cell analyses of discordant twins-derived cerebral organoids
Molecular Psychiatry·2020· 118 citedOpen Access
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
Nature Biotechnology·2020· 508 citedOpen Access
Primed to Naive-Like Conversion of the Common Marmoset Embryonic Stem Cells
Stem Cells and Development·2020· 18 cited
Cell type‐specific transcriptome analysis unveils secreted signaling molecule genes expressed in apical epithelial cap during appendage regeneration
Development Growth & Differentiation·2019· 12 citedOpen Access
Local assembly of chromatin at the transcription start site is inversely correlated to the level of transcription
The Molecular Biology Society of Japan·2019
Local states of chromatin compaction at transcription start sites control transcription levels
2019· 3 citedOpen Access
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects
2019· 29 citedOpen Access
Strategies for Converting RNA to Amplifiable cDNA for Single-Cell RNA Sequencing Methods
Advances in experimental medicine and biology·2019· 12 cited
Polysaccharide hydrolase of the hadal zone amphipods <i>Hirondellea gigas</i>
Bioscience Biotechnology and Biochemistry·2018· 13 citedOpen Access
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Frequent Co-authors

Itoshi Nikaido(29), Tetsutaro Hayashi(18), Atsushi Higashitani(13), Hiroki Danno(12), Kaori Tanaka(11), Masashi Ebisawa(9), Teru Ogura(8), Kunitoshi Yamanaka(7), Hitomi Takada(7), Akira Kurisaki(7), Mana Umeda(5), Noriaki Ishioka(5), Marta Gut(4), Mika Yoshimura(4), Tadafumi Kato(3), Satoru Ishihara(3), Takeru Kameda(3), Hayato Yamashita(3), Naoe Kotomura(3), Masayuki Abe(3)