Deborah Dean

University of California, San Francisco — United States

Immunology and Microbiology · Life Sciences

41h-index5.9kcitations127works1.42yr avg
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Research Topics

Reproductive tract infections research(96), Urinary Tract Infections Management(57), Syphilis Diagnosis and Treatment(17), Bacterial Identification and Susceptibility Testing(16), Urinary and Genital Oncology Studies(12)

Publications127 total

Rapid Colorimetric Point-of-Care Detection of Live Coliform Bacteria Using PMA-LAMP-mAuNP with Method Validation
Journal of Human Earth and Future·2026Open Access
Putative azithromycin-resistance mutations in <i>Chlamydia trachomatis</i> are globally distributed but arose before azithromycin was discovered
2025Open Access
Transcriptional profiling of Chlamydia trachomatis and its host in an ex vivo endocervical primary cell culture system using dual RNA sequencing
Frontiers in Cellular and Infection Microbiology·2025Open Access
Effect of Azithromycin treatment on the microbial composition, functional dynamics and resistomes of endocervical, vaginal and rectal microbiomes of women in Fiji with <i>Chlamydia trachomatis</i> infection
2025· 1 citedOpen Access
Enhanced <i>Chlamydia trachomatis</i> and <i>Neisseria gonorrhoeae</i> Sexually Transmitted Infections and Associated Risk Factors in Fiji Following the Coronavirus Disease 2019 Pandemic
Open Forum Infectious Diseases·2025· 3 citedOpen Access
Whole-genome automated assembly pipeline for <i>Chlamydia trachomatis</i> strains from reference, <i>in vitro</i> and clinical samples using the integrated CtGAP pipeline
NAR Genomics and Bioinformatics·2025· 5 citedOpen Access
Chlamydia suis undergoes interclade recombination promoting Tet-island exchange
BMC Genomics·2024· 2 citedOpen Access
Corrigendum: Patterns of within-host spread of Chlamydia trachomatis between vagina, endocervix and rectum revealed by comparative genomic analysis
Frontiers in Microbiology·2024Open Access
Unique microbial diversity, community composition, and networks among Pacific Islander endocervical and vaginal microbiomes with and without <i>Chlamydia trachomatis</i> infection in Fiji
mBio·2023· 6 citedOpen Access
Ocular Microbiota of Severe Meibomian Gland Dysfunction (Chronic Dry Eyes) after Intense Pulsed Light (IPL)
Emerging Science Journal·2023Open Access
The unique microbial diversity, community composition and networks of Pacific Islander endocervical and vaginal microbiomes in the presence or absence of <i>Chlamydia trachomatis</i> infection using metagenomic shotgun sequencing
2023Open Access
Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
New Microbes and New Infections·2023· 3 citedOpen Access
Patterns of within-host spread of Chlamydia trachomatis between vagina, endocervix and rectum revealed by comparative genomic analysis
Frontiers in Microbiology·2023· 10 citedOpen Access
Chlamydial and gonorrheal neglected sexually transmitted diseases among Pacific Islanders of the Western Pacific Region—A narrative review and call to action
PLoS neglected tropical diseases·2023· 5 citedOpen Access
Patterns of within-host spread of <i>Chlamydia trachomatis</i> between vagina, endocervix and rectum revealed by comparative genomic analysis
2023· 3 citedOpen Access
Multiplex recombinase polymerase amplification for high-risk and low-risk type HPV detection, as potential local use in single tube
Scientific Reports·2023· 9 citedOpen Access
Metagenomic Shotgun Sequencing of Endocervical, Vaginal, and Rectal Samples among Fijian Women with and without Chlamydia trachomatis Reveals Disparate Microbial Populations and Function across Anatomic Sites: a Pilot Study
Microbiology Spectrum·2022· 25 citedOpen Access
Causes and Outcomes of the Acute Chest Syndrome in Sickle Cell Disease
UNC Libraries·2021Open Access
Generation of Tetracycline and Rifamycin Resistant Chlamydia Suis Recombinants
Frontiers in Microbiology·2021· 11 citedOpen Access
Tryptophan Operon Diversity Reveals Evolutionary Trends among Geographically Disparate Chlamydia trachomatis Ocular and Urogenital Strains Affecting Tryptophan Repressor and Synthase Function
mBio·2021· 8 citedOpen Access
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Frequent Co-authors

Timothy D. Read(9), João Paulo Gomes(7), Sandeep J. Joseph(7), Maria José Borrego(6), Xavier Didelot(6), Naraporn Somboonna(5), William Bruno(4), Gail Bolan(4), Kim Millman(4), Ilada Choopara(4), S. Claiborne Johnston(3), Alexandra Nunes(3), Carlos Florindo(3), Simon Tavaré(3), Ram Prasad Kandel(3), Berna Atik(3), Elliott Vichinsky(2), Lynne Neumayr(2), Samir K. Ballas(2), Russell E. Ware(2)