Frédéric Cazals

Institut national de recherche en informatique et en automatique — France

Biochemistry, Genetics and Molecular Biology · Life Sciences

25h-index3.0kcitations180works1.22yr avg
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Research Topics

Protein Structure and Dynamics(46), Computational Geometry and Mesh Generation(29), 3D Shape Modeling and Analysis(25), Enzyme Structure and Function(24), Computer Graphics and Visualization Techniques(21)

Publications177 total

Simpler Protein Domain Identification Using Spectral Clustering
Proteins Structure Function and Bioinformatics·2025· 3 citedOpen Access
Author response for "Simpler Protein Domain Identification Using Spectral Clustering"
2024
AlphaFold predictions on whole genomes at a glance: a coherent view on packing properties, pLDDT values, and disordered regions
2024Open Access
Author response for "Simpler Protein Domain Identification Using Spectral Clustering"
2024
A mini-review of clustering algorithms and their theoretical properties, with applications to molecular science
SPIRE - Sciences Po Institutional REpository·2024· 1 citedOpen Access
Simpler protein domain identification using spectral clustering
2024· 3 citedOpen Access
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study
PROTEOMICS·2023· 25 citedOpen Access
Geometric constraints within tripeptides and the existence of tripeptide reconstructions
Journal of Computational Chemistry·2023· 2 citedOpen Access
Discriminating physiological from non-physiological interfaces in structures of protein complexes: a community-wide study
2023· 6 citedOpen Access
Enhanced conformational exploration of protein loops using a global parameterization of the backbone geometry
Journal of Computational Chemistry·2023· 2 citedOpen Access
Gene prioritization based on random walks with restarts and absorbing states, to define gene sets regulating drug pharmacodynamics from single-cell analyses
HAL (Le Centre pour la Communication Scientifique Directe)·2022Open Access
Gene prioritization based on random walks with restarts and absorbing states, to define gene sets regulating drug pharmacodynamics from single-cell analyses
PLoS ONE·2022Open Access
L’intelligence artificielle au défi du design de protéines : des prouesses et limites d’AlphaFold
2022
Enhanced conformational exploration of protein loops using a global parameterization of the backbone geometry
2022· 1 citedOpen Access
Geometric constraints within tripeptides and the existence of tripeptide reconstructions
2022· 2 citedOpen Access
Conflict coloring problems: (theory, complexity, algorithm), and application to multi-resolution modeling in structural bioinformatics
HAL (Le Centre pour la Communication Scientifique Directe)·2022Open Access
Efficient computation of the volume of a polytope in high-dimensions using Piecewise Deterministic Markov Processes
Lancaster EPrints (Lancaster University)·2022Open Access
L’essentiel du symposium UCAncer 2021 sur les approches multidisciplinaires de la recherche sur le cancer
Bulletin du Cancer·2022Open Access
Efficient computation of the volume of a polytope in high-dimensions using Piecewise Deterministic Markov Processes
arXiv (Cornell University)·2022· 5 citedOpen Access
Tripeptide loop closure: A detailed study of reconstructions based on Ramachandran distributions
Proteins Structure Function and Bioinformatics·2021· 6 cited
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Frequent Co-authors

Marc Pouget(7), Joachim Giesen(6), Jean‐Daniel Boissonnat(5), Pierre Boudinot(4), Sébastien Loriot(4), Simon Marillet(4), Chinmay Karande(3), Simon Fillatreau(3), Tom Dreyfus(3), Mark V. Pauly(3), Afra Zomorodian(3), Alix Lhéritier(3), Luc Jouneau(2), Marie‐Paule Lefranc(2), Edwige Quillet(2), Adrien Six(2), Oriol Sunyer(2), Claude Puech(2), Jean‐Charles Faugère(2), Fabrice Rouillier(2)