Ray Luo

University of California, Irvine — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

50h-index23.4kcitations239works4.02yr avg
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Research Topics

Protein Structure and Dynamics(97), DNA and Nucleic Acid Chemistry(34), Enzyme Structure and Function(33), Spectroscopy and Quantum Chemical Studies(29), RNA and protein synthesis mechanisms(24)

Publications239 total

BPS2026 – Methodological considerations for MM-PBSA calculations of binding affinities in highly charged protein-protein systems: A systematic study
Biophysical Journal·2026
BPS2026 – Singularity-free force fields for free-energy perturbation: A new framework for robust alchemical simulations
Biophysical Journal·2026
HMRM: A Hybrid Motion and Region-Fused Mamba Network for Micro-Expression Recognition
Sensors·2025Open Access
Myeloid-driven immunosuppression in head and neck cancer: single-cell ATAC/RNA and spatial transcriptomic perspectives
Frontiers in Oncology·2025Open Access
DEGAUSS: A Novel Softcore Force Field Using Double Exponential van der Waals and Gaussian Charge for Molecular Dynamics Simulations I: Theory and Validation
Journal of Chemical Theory and Computation·2025Open Access
Optimization of Lennard–Jones Parameters for Induced Dipole Polarizable Gaussian Multipole Force Field
The Journal of Physical Chemistry B·2025
End-to-End Modeling of Reaction Field Energy Using Data-Driven Geometric Graph Neural Networks
Journal of Chemical Theory and Computation·2025
Amino acid transporter CsBAT links GABA accumulation to flavonoid metabolism in <i>Camellia sinensis</i>
Horticulture Research·2025Open Access
Surrogate and Dimensionality Reduction-Based Coupled Optimization of Well Pattern and Fracture Network in Tight Oil Reservoirs
2025
Engineered Fusion Enzyme‐Mediated Non‐Consecutive Cyclization‐Glycosylation Enables Heterologous Synthesis of Antifungal Enfumafungin
Advanced Science·2025Open Access
Two-stage hybrid electricity market trading strategy optimization with renewable electricity under cap-and-trade policy
Energy Economics·2025· 2 cited
Identification of palmitoylated biomarkers in non-alcoholic fatty liver disease via integrated bioinformatics analysis and machine learning
Scientific Reports·2025Open Access
Lipid oxidation driven olefinic aldehyde biosynthesis shapes aged aroma in Qingzhuan tea
Food Chemistry X·2025· 3 citedOpen Access
Modeling immiscible viscous fingering in deformed multi-scale fracture-porous media
Physics of Fluids·2025
Grid-Context Convolutional Model for Efficient Molecular Surface Construction from Point Clouds
Journal of Chemical Theory and Computation·2025· 2 cited
Extending MMPBSA for membrane proteins: Addressing P2Y12R conformational changes upon ligand binding
Biophysical Journal·2025
Accounting for and optimizing efficient consumption of large-scale new energy sources on the grid with multitimescale uncertainties
2025
Conformal Thresholded Intervals for Efficient Regression
Proceedings of the AAAI Conference on Artificial Intelligence·2025· 3 citedOpen Access
Isotropic Periodic Sum for Polarizable Gaussian Multipole Model
Journal of Chemical Theory and Computation·2025· 2 cited
Extending the MMPBSA method to membrane proteins: Addressing conformational changes upon ligand binding to P2Y12R
2025Open Access
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Frequent Co-authors

Haifeng Chen(10), Junmei Wang(9), Jun Wang(7), Qin Cai(7), Yong Duan(6), Piotr Cieplak(6), Michael K. Gilson(6), Ruxi Qi(5), Song Dong(5), Hao Liu(5), Peter A. Kollman(4), Meng-Juei Hsieh(4), David A. Case(3), Thomas E. Cheatham(3), Holger Gohlke(3), Kenneth M. Merz(3), Alexey V. Onufriev(3), Carlos Simmerling(3), Tai‐Sung Lee(3), Edward J. King(3)