Toshiyuki Shiraki

Biochemistry, Genetics and Molecular Biology · Life Sciences

22h-index9.6kcitations37works3.02yr avg
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Research Topics

Zebrafish Biomedical Research Applications(13), Genomics and Phylogenetic Studies(7), RNA and protein synthesis mechanisms(7), RNA Research and Splicing(6), Genomics and Chromatin Dynamics(4)

Publications35 total

Structural characterization of zebrafish Ngly2, an ovary-enriched acid PNGase required for egg-free glycan production
Journal of Biological Chemistry·2025Open Access
The serotonergic neurons derived from rhombomere 2 are localized in the median raphe and project to the dorsal pallium in zebrafish
Neuroscience Research·2024· 1 citedOpen Access
Transgenic tools targeting the basal ganglia reveal both evolutionary conservation and specialization of neural circuits in zebrafish
Cell Reports·2024· 8 citedOpen Access
Transgenic tools targeting striatal and pallidal subpopulations revealed evolutionary conservation and specialization of the cortico-basal ganglia circuit in zebrafish
2023Open Access
Author response for "Identification of a functional susceptibility variant for adolescent idiopathic scoliosis that upregulates <scp>EGR1</scp> ‐mediated <i>UNCX</i> expression"
2022
Identification of a Functional Susceptibility Variant for Adolescent Idiopathic Scoliosis that Upregulates Early Growth Response 1 (EGR1)-Mediated UNCX Expression
Journal of Bone and Mineral Research·2020· 4 cited
Genome sequence and analysis of the Japanese morning glory Ipomoea nil
Nature Communications·2016· 178 citedOpen Access
Social conflict resolution regulated by two dorsal habenular subregions in zebrafish
Science·2016· 201 cited
Imaging of the neural circuit activities during retrieval of behavioral program for active avoidance in zebrafish
2015
The Habenulo-Raphe Serotonergic Circuit Encodes an Aversive Expectation Value Essential for Adaptive Active Avoidance of Danger
Neuron·2014· 244 citedOpen Access
Visualization of zebrafish striatum direct and indirect pathway projection neurons
Neuroscience Research·2011
Genetic manipulation of mammalian lateral and medial habenula homolog in zebrafish: Toward functional analysis of the habenula
Neuroscience Research·2011
The habenula is crucial for experience-dependent modification of fear responses in zebrafish
Nature Neuroscience·2010· 405 cited
Experience-dependent choice of fear responses is regulated by the habenula in zebrafish
Neuroscience Research·2010
Genetic inactivation of the habenulo-interpeduncular projection enhances the conditioned fear response in zebrafish
Neuroscience Research·2009
Novel mutations affecting axon guidance in zebrafish and a role for plexin signalling in the guidance of trigeminal and facial nerve axons
Development·2007· 46 cited
Involvement of DMAP1 in the neural migration and differentiation in zebrafish
Neuroscience Research·2007
Development of a super-high pressure water-jet chipping robot for demolition of boiler tube protection refractory material
2007
A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes
Proceedings of the National Academy of Sciences·2006· 200 citedOpen Access
Transcriptome analysis of the aphid bacteriocyte, the symbiotic host cell that harbors an endocellular mutualistic bacterium, <i>Buchnera</i>
Proceedings of the National Academy of Sciences·2005· 227 citedOpen Access
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Frequent Co-authors

Piero Carninci(17), Hitoshi Okamoto(15), Yoshihide Hayashizaki(12), Jun Kawai(9), Takahiro Arakawa(9), Shin‐ichi Higashijima(8), Masakazu Agetsuma(7), Tazu Aoki(7), Koichi Kawakami(6), Mikako Takahoko(6), Hisaya Kakinuma(6), Masayoshi Itoh(5), Daisuke Sasaki(5), Kazuhiro Shibata(5), Akira Watahiki(5), Mari Nakamura(5), Hidenori Aizawa(5), Ryoko Nakayama(5), Ryunosuke Amo(5), Masami Muramatsu(5)