Vahid Abrishami

University of Helsinki — Finland

Biochemistry, Genetics and Molecular Biology · Life Sciences

13h-index1.3kcitations29works0.02yr avg
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Research Topics

Advanced Electron Microscopy Techniques and Applications(13), Electron and X-Ray Spectroscopy Techniques(8), Cell Image Analysis Techniques(5), Advanced Fluorescence Microscopy Techniques(4), Bacteriophages and microbial interactions(4)

Publications29 total

Signal peptide mimicry primes Sec61 for client-selective inhibition
Nature Chemical Biology·2023· 32 citedOpen Access
Cryo-EM structure of ssDNA bacteriophage ΦCjT23 provides insight into early virus evolution
Nature Communications·2022· 8 citedOpen Access
Signal peptide mimicry primes Sec61 for client-selective inhibition
2022· 9 citedOpen Access
New Vista into Origins of Viruses from a Prototypic ssDNA Phage
2022Open Access
New Vista into Origins of Viruses from a Prototypic ssDNA Phage
2022Open Access
Structure of a Cell Entry Defective Human Adenovirus Provides Insights into Precursor Proteins and Capsid Maturation
Journal of Molecular Biology·2021· 10 citedOpen Access
ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions
Progress in Biophysics and Molecular Biology·2021· 4 cited
Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data
Progress in Biophysics and Molecular Biology·2020· 58 citedOpen Access
Tox_(R)CNN: Deep learning-based nuclei profiling tool for drug toxicity screening
PLoS Computational Biology·2018· 78 citedOpen Access
Tox_(R)CNN: Deep Learning-Based Nuclei Profiling tool For Drug Toxicity Screening
2018· 9 citedOpen Access
A review of resolution measures and related aspects in 3D Electron Microscopy
Progress in Biophysics and Molecular Biology·2016· 35 cited
New computational methods toward atomic resolution in single particle cryo-electron microscopy
LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)·2016
Structures of Human Peroxiredoxin 3 Suggest Self-Chaperoning Assembly that Maintains Catalytic State
Structure·2016· 42 citedOpen Access
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
Journal of Structural Biology·2016· 628 citedOpen Access
Local analysis of strains and rotations for macromolecular electron microscopy maps
Journal of Structural Biology·2016· 10 cited
Cryo-EM and the elucidation of new macromolecular structures: Random Conical Tilt revisited
Scientific Reports·2015· 18 citedOpen Access
A fast iterative convolution weighting approach for gridding-based direct Fourier three-dimensional reconstruction with correction for the contrast transfer function
Ultramicroscopy·2015· 28 cited
Alignment of direct detection device micrographs using a robust Optical Flow approach
Journal of Structural Biology·2015· 68 cited
A statistical approach to the initial volume problem in Single Particle Analysis by Electron Microscopy
Journal of Structural Biology·2015· 32 cited
Fast and accurate conversion of atomic models into electron density maps
AIMS Biophysics·2015· 47 citedOpen Access
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Frequent Co-authors

Javier Vargas(13), Carlos Óscar S. Sorzano(13), J.M. Carazo(13), R. Marabini(12), J.M. de la Rosa-Trevín(10), Joaquı́n Otón(9), Juha T. Huiskonen(7), Josué Gómez-Blanco(4), Ilona Rissanen(4), I. Foche(3), José Luis Vilas(3), A. Zaldívar-Peraza(3), Maryam Sabzevari(3), Nejc Kejzar(3), Elina Laanto(3), Sylvain Moineau(3), Janne Ravantti(3), Lotta‐Riina Sundberg(3), Laura del Caño(2), A. Zaldívar(2)