Kristoffer Vitting‐Seerup

Technical University of Denmark — Denmark

Biochemistry, Genetics and Molecular Biology · Life Sciences

23h-index3.8kcitations112works6.12yr avg
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Research Topics

RNA modifications and cancer(31), RNA Research and Splicing(27), Bioinformatics and Genomic Networks(23), Cancer-related molecular mechanisms research(20), RNA and protein synthesis mechanisms(16)

Publications110 total

CD19 exon 2 skipping is a potential prognostic correlate of anti-CD19 CAR-T therapy relapse
Frontiers in Molecular Medicine·2026Open Access
IsoformSwitchAnalyzeR v2: Analysis of Functional Isoform Changes in Long-read and Single-cell Sequencing Data
2025Open Access
Beyond the Gene in Genetics: How Isoform-Resolved Analysis Empowers the Study of Both Common and Rare Genetic Variation
2025· 1 citedOpen Access
ANGI-08. SPATIAL TRANSCRIPTOMIC COMPARISONS OF GLIOBLASTOMA TISSUE REVEAL UPREGULATION OF NEURODEVELOPMENTAL PATHWAYS AND SYNAPTIC GENES IN INFILTRATING TUMOR CELLS
Neuro-Oncology·2024Open Access
Glioblastoma cells increase expression of notch signaling and synaptic genes within infiltrated brain tissue
Nature Communications·2024· 42 citedOpen Access
Correction: Progression of the pluripotent epiblast depends upon the NMD factor UPF2
Development·2024Open Access
Abstract 1144: Glioblastoma cells increase expression of neurodevelopmental programs and synaptic connectivity in the tumor periphery
Cancer Research·2024
Expression and splicing mediate distinct biological signals
BMC Biology·2023· 14 citedOpen Access
Author response for "Building flexible and robust analysis frameworks for molecular subtyping of cancers"
2023
Most protein domains exist as variants with distinct functions across cells, tissues and diseases
NAR Genomics and Bioinformatics·2023· 4 citedOpen Access
Building flexible and robust analysis frameworks for molecular subtyping of cancers
2023· 1 citedOpen Access
Paired differential gene expression and splicing analyses results of 199 baseline vs. case comparisons across 100 datasets
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Paired differential gene expression and splicing analyses results of 199 baseline vs. case comparisons across 100 datasets (Limma)
Zenodo (CERN European Organization for Nuclear Research)·2023· 1 citedOpen Access
Paired differential gene expression and splicing analyses results of 199 baseline vs. case comparisons across 100 datasets
Zenodo (CERN European Organization for Nuclear Research)·2023· 1 citedOpen Access
Paired differential gene expression and splicing analyses results of 199 baseline vs. case comparisons across 100 datasets (Limma)
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Table S1 from The Landscape of Isoform Switches in Human Cancers
2023Open Access
Supplementary Table 2 from The RNA m6A Reader YTHDF2 Maintains Oncogene Expression and Is a Targetable Dependency in Glioblastoma Stem Cells
2023Open Access
Table S3 from The Landscape of Isoform Switches in Human Cancers
2023Open Access
Supplementary Data from The RNA m6A Reader YTHDF2 Maintains Oncogene Expression and Is a Targetable Dependency in Glioblastoma Stem Cells
2023Open Access
Data from The Landscape of Isoform Switches in Human Cancers
2023Open Access
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Frequent Co-authors

Albin Sandelin(13), Petra Hamerlik(9), Lars Rønn Olsen(8), Robin Andersson(7), Bo Porse(6), Jane Skjøth‐Rasmussen(6), Jeroen Gilis(6), Koen Van den Berge(6), Lieven Clement(6), Henriette Pedersen(5), Kamilla E. Jensen(5), Peter Arner(4), Morana Vitezic(4), Johannes Waage(4), Jette Bornholdt(4), Hans Skovgaard Poulsen(4), Camilla Bjørnbak Holst(4), Søren Helweg Dam(4), Berit Lilje(3), Michiel de Hoon(3)