Milena Pavlović

University of Oslo — Norway

Biochemistry, Genetics and Molecular Biology · Life Sciences

15h-index840citations42works4.32yr avg
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Research Topics

vaccines and immunoinformatics approaches(14), Monoclonal and Polyclonal Antibodies Research(11), Immune Cell Function and Interaction(11), T-cell and B-cell Immunology(9), Glycosylation and Glycoproteins Research(4)

Publications42 total

Identification of a type 1 diabetes–associated T cell receptor repertoire signature from the human peripheral blood
Science Advances·2026Open Access
Quantitative mapping of antigen specificity in adaptive immune repertoire embedding spaces
2025Open Access
Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning
Nucleic Acids Research·2025· 4 citedOpen Access
Identification of a type 1 diabetes-associated T cell receptor repertoire signature from the human peripheral blood
2024· 8 citedOpen Access
Revealing the hidden sequence distribution of epitope-specific TCR repertoires and its influence on machine learning model performance
2024· 1 citedOpen Access
BioNumPy: array programming for biology
Nature Methods·2024· 4 cited
Predictability of antigen binding based on short motifs in the antibody CDRH3
Briefings in Bioinformatics·2024· 2 citedOpen Access
Improving generalization of machine learning-identified biomarkers using causal modelling with examples from immune receptor diagnostics
Nature Machine Intelligence·2024· 14 cited
Machine learning-driven development of a disease risk score for COVID-19 hospitalization and mortality: a Swedish and Norwegian register-based study
Frontiers in Public Health·2023· 4 citedOpen Access
Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning
2023· 5 citedOpen Access
Artificial intelligence-driven prediction of COVID-19-related hospitalization and death: a systematic review
Frontiers in Public Health·2023· 21 citedOpen Access
Supplementary results for experiment 1 for the second version of manuscript titled "Improving generalization of machine learning-identified biomarkers with causal modeling: an investigation into immune receptor diagnostics"
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Supplementary results for AIR part of experiment 3 for the second version of manuscript titled "Improving generalization of machine learning-identified biomarkers with causal modeling: an investigation into immune receptor diagnostics"
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Supplementary results for experiment 2 for the second version of manuscript titled "Improving generalization of machine learning-identified biomarkers with causal modeling: an investigation into immune receptor diagnostics"
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
simAIRR: simulation of adaptive immune repertoires with realistic receptor sequence sharing for benchmarking of immune state prediction methods
GigaScience·2022· 7 citedOpen Access
BioNumPy: Fast and easy analysis of biological data with Python
2022· 12 citedOpen Access
Unconstrained generation of synthetic antibody–antigen structures to guide machine learning methodology for antibody specificity prediction
Nature Computational Science·2022· 54 cited
Improving generalization of machine learning-identified biomarkers with causal modeling: an investigation into immune receptor diagnostics
arXiv (Cornell University)·2022· 7 citedOpen Access
In silico proof of principle of machine learning-based antibody design at unconstrained scale
mAbs·2022· 88 citedOpen Access
Profiling the baseline performance and limits of machine learning models for adaptive immune receptor repertoire classification
GigaScience·2022· 22 citedOpen Access
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Frequent Co-authors

Geir Kjetil Sandve(34), Victor Greiff(30), Lonneke Scheffer(20), Maria Chernigovskaya(17), Chakravarthi Kanduri(15), Rahmad Akbar(13), Ingrid Hobæk Haff(13), Philippe A. Robert(12), Igor Snapkov(12), Andrei Slabodkin(12), Michael Widrich(11), Cédric R. Weber(10), Günter Klambauer(10), Ghadi S. Al Hajj(9), Ludvig M. Sollid(9), Sepp Hochreiter(8), Fridtjof Lund‐Johansen(7), Brij Bhushan Mehta(7), Johan Pensar(7), Enkelejda Miho(6)