Michal Klein

Helmholtz Zentrum München — Germany

Biochemistry, Genetics and Molecular Biology · Life Sciences

20h-index3.7kcitations108works11.32yr avg
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Research Topics

Single-cell and spatial transcriptomics(16), Pluripotent Stem Cells Research(9), Plant Virus Research Studies(6), Gene Regulatory Network Analysis(6), Insect Resistance and Genetics(6)

Publications104 total

Completed Hyperparameter Transfer across Modules, Width, Depth, Batch and Duration
arXiv (Cornell University)·2025Open Access
Completed Hyperparameter Transfer across Modules, Width, Depth, Batch and Duration
ArXiv.org·2025Open Access
OmniPath: integrated knowledgebase for multi-omics analysis
Nucleic Acids Research·2025· 4 citedOpen Access
The Data-Quality Illusion: Rethinking Classifier-Based Quality Filtering for LLM Pretraining
arXiv (Cornell University)·2025Open Access
OmniPath: integrated knowledgebase for multi-omics analysis
2025Open Access
Defining and benchmarking open problems in single-cell analysis
Nature Biotechnology·2025· 17 citedOpen Access
The Geometries of Truth Are Orthogonal Across Tasks
arXiv (Cornell University)·2025Open Access
Multimodal Autoregressive Pre-training of Large Vision Encoders
2025· 4 cited
On Fitting Flow Models with Large Sinkhorn Couplings
arXiv (Cornell University)·2025Open Access
LinEAS: End-to-end Learning of Activation Steering with a Distributional Loss
arXiv (Cornell University)·2025Open Access
Multivariate Conformal Prediction using Optimal Transport
arXiv (Cornell University)·2025Open Access
Mapping cells through time and space with moscot
Nature·2025· 81 citedOpen Access
Endothelial Damage Inhibitor Protects Endothelial Cytoskeletal Integrity during Storage and Endothelial Cell Retention during Simulated Reperfusion
The Thoracic and Cardiovascular Surgeon·2025
Multimodal Autoregressive Pre-training of Large Vision Encoders
arXiv (Cornell University)·2024· 2 citedOpen Access
Controlling Language and Diffusion Models by Transporting Activations
arXiv (Cornell University)·2024Open Access
Mapping lineage-traced cells across time points with moslin
Genome biology·2024· 21 citedOpen Access
Simple ReFlow: Improved Techniques for Fast Flow Models
arXiv (Cornell University)·2024Open Access
Effect of Opaganib on Supplemental Oxygen and Mortality in Patients with Severe SARS-CoV-2 Based upon FIO2 Requirements
Microorganisms·2024· 5 citedOpen Access
CellRank 2: unified fate mapping in multiview single-cell data
Nature Methods·2024· 146 citedOpen Access
Progressive Entropic Optimal Transport Solvers
arXiv (Cornell University)·2024Open Access
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Frequent Co-authors

Fabian J. Theis(16), Marius Lange(10), Giovanni Palla(7), Dana Pe’er(6), Ira J. Goldberg(6), Mostafa Bakhti(5), Heiko Lickert(5), I. Harpaz(5), Volker Bergen(4), Julio Sáez-Rodríguez(4), Uday Saxena(4), Dominik Klein(4), Zoe Piran(4), Mor Nitzan(4), A. Horowitz(4), David S. Fischer(3), Anna C. Schaar(3), Sergei Rybakov(3), Isaac Virshup(3), Mohammad Lotfollahi(3)