Margreet Bakker

Leiden University — Netherlands

Immunology and Microbiology · Life Sciences

42h-index6.9kcitations170works2.02yr avg
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Research Topics

HIV Research and Treatment(87), HIV/AIDS Research and Interventions(40), HIV/AIDS drug development and treatment(39), Immune Cell Function and Interaction(21), T-cell and Retrovirus Studies(13)

Publications163 total

HIV-phyloTSI: subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data
BMC Bioinformatics·2025Open Access
Incidence of hepatitis C virus infection and associated determinants among men who have sex with men without HIV in Amsterdam, the Netherlands, between 2012 and 2021
European Journal of Gastroenterology & Hepatology·2025· 2 citedOpen Access
Untreated HIV-1 infection and low CD4+ T cell counts and their effect on endemic human coronavirus (re)infection
PLOS Global Public Health·2025Open Access
MODULATION OF ARCHAEAL HYPERNUCLEOSOME STRUCTURE AND STABILITY BY Mg <sup>2+</sup>
2025· 1 citedOpen Access
The genetic architecture of HIV-1 virulence
Virus Evolution·2025Open Access
Polyfunctionality and breadth of HIV-1 antibodies are associated with delayed disease progression
PLoS Pathogens·2024· 4 citedOpen Access
A Biomarker Profile Reflective of Preserved Thymic Function Is Associated With Reduced Comorbidities in Aging People With HIV: An AGEhIV Cohort Analysis
The Journal of Infectious Diseases·2024Open Access
Similar Limited Protection Against Severe Acute Respiratory Syndrome Coronavirus 2 Omicron Infection in Vaccinated Individuals With HIV and Comparable Controls
Open Forum Infectious Diseases·2024· 2 citedOpen Access
Influenza-like illness symptoms due to endemic human coronavirus reinfections are not influenced by the length of the interval separating reinfections
Microbiology Spectrum·2024· 4 citedOpen Access
Determinants of epidemic size and the impacts of lulls in seasonal influenza virus circulation
Nature Communications·2024· 9 citedOpen Access
POS0920 QUANTIFICATION OF TENOSYNOVITIS IN RA FROM WRIST MRIs, BASED ON DEEP LEARNING
Annals of the Rheumatic Diseases·2023· 2 citedOpen Access
Robust Vaccine-Induced as Well as Hybrid B- and T-Cell Immunity across SARS-CoV-2 Vaccine Platforms in People with HIV
Microbiology Spectrum·2023· 13 citedOpen Access
Anellovirus evolution during long-term chronic infection
Virus Evolution·2023· 17 citedOpen Access
Control of Human Anelloviruses by Cytosine to Uracil Genome Editing
mSphere·2022· 7 citedOpen Access
Transmission of anelloviruses to HIV-1 infected children
Frontiers in Microbiology·2022· 2 citedOpen Access
HIV-phyloTSI: Subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data
2022· 9 citedOpen Access
Diversity and Long-Term Dynamics of Human Blood Anelloviruses
Journal of Virology·2022· 42 citedOpen Access
Early-Life Colonization by Anelloviruses in Infants
Viruses·2022· 21 citedOpen Access
Potential impacts of prolonged absence of influenza virus circulation on subsequent epidemics
2022· 2 citedOpen Access
A highly virulent variant of HIV-1 circulating in the Netherlands
Science·2022· 73 citedOpen Access
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Frequent Co-authors

Ben Berkhout(15), Jaap Goudsmit(13), Suzanne Jurriaans(10), Lia van der Hoek(8), Martin Deijs(6), Marion Cornelissen(6), Jan M. Prins(6), Peter Reiss(6), Berend C. Stoel(6), Jan Stolk(6), Maarten F. Jebbink(5), Alexander Pasternak(5), Johan H. C. Reiber(5), Cormac M. Kinsella(4), Maria Prins(4), Tom F.W. Wolfs(4), Gabriël Zwart(4), Roel A. Coutinho(4), Vladimir V. Lukashov(4), Daniela Bezemer(4)