Emily F. Ruff

Winona State University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

10h-index692citations25works15.82yr avg
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Research Topics

Bacterial Genetics and Biotechnology(11), RNA and protein synthesis mechanisms(10), DNA and Nucleic Acid Chemistry(9), Microtubule and mitosis dynamics(5), Gene Regulatory Network Analysis(3)

Publications25 total

Discussing the Ethics of Professional AI Use in Undergraduate Chemistry Courses
Journal of Chemical Education·2025· 9 citedOpen Access
Using ChatGPT for Method Development and Green Chemistry Education in Upper-Level Laboratory Courses
Journal of Chemical Education·2024· 20 citedOpen Access
ChatGPT Writing Assistance and Evaluation Assignments Across the Chemistry Curriculum
Journal of Chemical Education·2024· 34 citedOpen Access
Abstract 1622 Generative AI Assignments Across the Chemistry Curriculum
Journal of Biological Chemistry·2024Open Access
An Analysis of AI-Generated Laboratory Reports across the Chemistry Curriculum and Student Perceptions of ChatGPT
Journal of Chemical Education·2023· 60 citedOpen Access
Investigation of Disease‐Causing Point Variants of Vaccinia‐Related Kinase 1 (VRK1)
The FASEB Journal·2022
Combined <i>In Vitro</i> and Computational Investigations of Protein Kinase Point Mutations for the Undergraduate Teaching Lab
The FASEB Journal·2021
Investigation of Activity and Nucleotide Binding of Vaccinia-related Kinase 3 (VRK3)
2019
Quantitative conformational profiling of kinase inhibitors reveals origins of selectivity for Aurora kinase activation states
Proceedings of the National Academy of Sciences·2018· 64 citedOpen Access
A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation
eLife·2018· 68 citedOpen Access
Author response: A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation
2018· 1 citedOpen Access
A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation
2017· 3 citedOpen Access
Mechanism of transcription initiation and promoter escape by <i>E</i> . <i>coli</i> RNA polymerase
Proceedings of the National Academy of Sciences·2017· 90 citedOpen Access
A water-mediated allosteric network governs activation of Aurora kinase A
Nature Chemical Biology·2017· 64 citedOpen Access
Systematic Studies of Effects of the Discriminator on Stabilization of the Open Complex and Abortive and Productive Initiation
The FASEB Journal·2016· 3 cited
Kinetics and Mechanism of Formation and Stabilization of the RNA Polymerase-Promoter Open Compex
Biophysical Journal·2016Open Access
Large Effects of Discriminator Exchanges on the RNA Polymerase-Promoter Open Complex Structure, Lifetime and Transcription Initiation Patterns
Biophysical Journal·2016Open Access
E. coli RNA Polymerase Determinants of Open Complex Lifetime and Structure
Journal of Molecular Biology·2015· 52 cited
Initial Events in Bacterial Transcription Initiation
Biomolecules·2015· 188 citedOpen Access
Using Solutes and Kinetics to Probe Large Conformational Changes in the Steps of Transcription Initiation
Methods in molecular biology·2015· 4 cited
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Frequent Co-authors

M. Thomas Record(10), Irina Artsimovitch(8), Nicholas M. Levinson(5), Amanda C. Drennan(5), Munish Chhabra(4), Joseph M. Muretta(4), Andrew R. Thompson(4), Eric W. Lake(4), Soreen Cyphers(4), Julie M. Behr(4), David D. Thomas(4), John D. Chodera(4), Jeanne L. Franz(4), Mikaela Poulos(4), Kate Henderson(3), Lindsey Felth(3), Cristen Molzahn(3), Si Wang(3), Lauren Bieter(3), Steven K. Albanese(3)