Maria Zimmermann‐Kogadeeva

European Molecular Biology Laboratory — Spain

Biochemistry, Genetics and Molecular Biology · Life Sciences

17h-index5.1kcitations55works11.22yr avg
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Research Topics

Gut microbiota and health(20), Diet and metabolism studies(14), Clostridium difficile and Clostridium perfringens research(8), Bacterial Genetics and Biotechnology(6), RNA and protein synthesis mechanisms(6)

Publications55 total

Gut Microbiome changes in post-bariatrical surgery patients: Initial results of a Mannheim cohort
Zeitschrift für Gastroenterologie·2026
GEMsembler: consensus model assembly and structural comparison of genome-scale metabolic models across tools improve functional performance
mSystems·2025Open Access
Der Einfluss des Darm-Mikrobioms auf die Verfügbarkeit und das Nebenwirkungsprofil von 5-Fluorouracil
Zeitschrift für Gastroenterologie·2025
Multi-omics profiling of cross-resistance between ceftazidime-avibactam and meropenem identifies common and strain-specific mechanisms in <i>Pseudomonas aeruginosa</i> clinical isolates
mBio·2025· 1 citedOpen Access
In-cell discovery and characterization of a non-canonical bacterial protein translocation-folding complex
2025· 4 citedOpen Access
GEMsembler: cross-tool structural comparison and ensemble modeling improve metabolic model performance
2025Open Access
Comparative Assessment of Protein Large Language Models for Enzyme Commission Number Prediction
BMC Bioinformatics·2025· 8 citedOpen Access
Multi-omics profiling of cross-resistance between ceftazidime-avibactam and meropenem identifies common and strain-specific mechanisms in <i>Pseudomonas aeruginosa</i> clinical isolates
2025· 1 citedOpen Access
Pervasive sublethal effects of agrochemicals on insects at environmentally relevant concentrations
Science·2024· 93 cited
Pervasive sublethal effects of agrochemicals as contributing factors to insect decline
2024· 5 citedOpen Access
Consistency across multi‐omics layers in a drug‐perturbed gut microbial community
Molecular Systems Biology·2023· 12 citedOpen Access
Recent advances in data- and knowledge-driven approaches to explore primary microbial metabolism
Current Opinion in Chemical Biology·2023· 8 citedOpen Access
Consistency across multi-omics layers in a drug-perturbed gut microbial community
2023· 1 citedOpen Access
Consistency across multi-omics layers in a drug-perturbed gut microbial community
Figshare·2023Open Access
Publisher Correction: Visualizing translation dynamics at atomic detail inside a bacterial cell
Nature·2022· 13 citedOpen Access
Visualizing translation dynamics at atomic detail inside a bacterial cell
Nature·2022· 186 citedOpen Access
Proccessed Data for the Pipelines of the Project "Multiomics and quantitative modelling disentangle diet, host, and microbiota contributions to the host metabolome"
2022Open Access
Multiomics and quantitative modelling disentangle diet, host, and microbiota contributions to the host metabolome
2022· 1 citedOpen Access
Proccessed Data for the Pipelines of the Project "Multiomics and quantitative modelling disentangle diet, host, and microbiota contributions to the host metabolome"
Zenodo (CERN European Organization for Nuclear Research)·2022Open Access
Proccessed Data for the Pipelines of the Project "Multiomics and quantitative modelling disentangle diet, host, and microbiota contributions to the host metabolome"
Zenodo (CERN European Organization for Nuclear Research)·2022Open Access
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Frequent Co-authors

Michael Zimmermann(21), Peer Bork(13), Andrew L. Goodman(12), Sofia K. Forslund(7), Judith Aron‐Wisnewsky(7), Rima Chakaroun(7), Trine Nielsen(7), Uwe Sauer(7), Bartosz J. Bartmanski(7), Lajos Markó(6), Till Birkner(6), Renato Alves(5), Thomas Schmidt(5), Natasha A. Bencivenga-Barry(5), Matthias Mann(4), Rebekka Wegmann(4), Michael Kuhn(4), Kiran Raosaheb Patil(4), Liang Xue(4), Swantje Lenz(4)