Wenjia He

King Abdullah University of Science and Technology — Saudi Arabia

Biochemistry, Genetics and Molecular Biology · Life Sciences

10h-index465citations21works8.92yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

Machine Learning in Bioinformatics(6), RNA and protein synthesis mechanisms(4), Genomics and Phylogenetic Studies(3), Advanced Image and Video Retrieval Techniques(3), Privacy-Preserving Technologies in Data(3)

Publications21 total

DigitalShadow: An Early Warning System of Coronary Artery Disease based on Facial Foundation Model
2025Open Access
CFP-Gen: Combinatorial Functional Protein Generation via Diffusion Language Models
arXiv (Cornell University)·2025Open Access
Facial Foundational Model Advances Early Warning of Coronary Artery Disease from Live Videos with DigitalShadow
arXiv (Cornell University)·2025Open Access
<scp>AggNet</scp>: Advancing protein aggregation analysis through deep learning and protein language model
Protein Science·2025· 2 citedOpen Access
An AI Agent for Fully Automated Multi‐Omic Analyses
Advanced Science·2024· 44 citedOpen Access
SANTO: a coarse-to-fine alignment and stitching method for spatial omics
Nature Communications·2024· 19 citedOpen Access
HELM-GPT: <i>de novo</i> macrocyclic peptide design using generative pre-trained transformer
Bioinformatics·2024· 11 citedOpen Access
Optimizing Video Selection LIMIT Queries with Commonsense Knowledge
Proceedings of the VLDB Endowment·2024· 4 cited
Towards Query Processing in Video Database Management Systems
Deep Blue (University of Michigan)·2024Open Access
CoraL: interpretable contrastive meta-learning for the prediction of cancer-associated ncRNA-encoded small peptides
Briefings in Bioinformatics·2023· 11 cited
An AI Agent for Fully Automated Multi-omic Analyses
2023· 6 citedOpen Access
PAINE Demo: Optimizing Video Selection Queries with Commonsense Knowledge
Proceedings of the VLDB Endowment·2023· 1 cited
Audit to Forget: A Unified Method to Revoke Patients’ Private Data in Intelligent Healthcare
2023· 5 citedOpen Access
Audit to Forget: A Unified Method to Revoke Patients' Private Data in Intelligent Healthcare
arXiv (Cornell University)·2023Open Access
Controlled Intentional Degradation in Analytical Video Systems
Proceedings of the 2022 International Conference on Management of Data·2022· 1 cited
Accelerating bioactive peptide discovery via mutual information-based meta-learning
Briefings in Bioinformatics·2021· 55 cited
iDNA-ABT: advanced deep learning model for detecting DNA methylation with adaptive features and transductive information maximization
Bioinformatics·2021· 57 cited
Learning embedding features based on multisense-scaled attention architecture to improve the predictive performance of anticancer peptides
Bioinformatics·2021· 67 cited
PSSP-MVIRT: peptide secondary structure prediction based on a multi-view deep learning architecture
Briefings in Bioinformatics·2021· 21 cited
Computational prediction and interpretation of cell-specific replication origin sites from multiple eukaryotes by exploiting stacking framework
Briefings in Bioinformatics·2020· 147 cited
page 1 of 2Next →

Frequent Co-authors

Xin Gao(10), Haoyang Li(7), Leyi Wei(6), Juexiao Zhou(5), Chencheng Xu(5), Ran Su(4), Lizhen Cui(4), Bin Zhang(4), Xiaopeng Xu(4), Michael Cafarella(4), Junru Jin(3), Juexiao Zhou(3), Balachandran Manavalan(2), Zhongshen Li(2), Xiuying Chen(2), Siyuan Chen(2), Lesong Wei(2), Xingyu Liao(2), Zhongxiao Li(2), Longxi Zhou(2)