Keren Bahar Halpern

Weizmann Institute of Science — Israel

Biochemistry, Genetics and Molecular Biology · Life Sciences

27h-index6.3kcitations70works5.82yr avg
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Research Topics

Single-cell and spatial transcriptomics(19), Gut microbiota and health(10), Cancer Cells and Metastasis(9), Pancreatic function and diabetes(9), Cancer Genomics and Diagnostics(7)

Publications70 total

Spatial Rewiring of Enterocyte Identity in Celiac Disease
2026Open Access
Transcriptomic profiling of shed cells enables spatial mapping of cellular turnover in human organs
Molecular Systems Biology·2025· 1 citedOpen Access
Stool shed cell transcriptomics mirrors tumor biology and enables colorectal cancer diagnosis
Scientific Reports·2025Open Access
Stool shed cell transcriptomics mirrors tumor biology and enable colorectal cancer diagnosis
2025
A spatial transcriptomics atlas of live donors reveals unique zonation patterns in the healthy human liver
2025· 6 citedOpen Access
P0205 Fecal host transcriptomics accurately assesses endoscopic inflammatory activity in patients with inflammatory bowel diseases
Journal of Crohn s and Colitis·2025
Intracellular polarization of RNAs and proteins in the human small intestinal epithelium
PLoS Biology·2024· 5 citedOpen Access
The cellular states and fates of shed intestinal cells
Zenodo (CERN European Organization for Nuclear Research)·2024· 1 citedOpen Access
The cellular states and fates of shed intestinal cells
Zenodo (CERN European Organization for Nuclear Research)·2024Open Access
A spatial expression atlas of the adult human proximal small intestine
Nature·2024· 45 cited
The cellular states and fates of shed intestinal cells
Nature Metabolism·2023· 12 cited
Supplementary Data from Acid-Induced Downregulation of ASS1 Contributes to the Maintenance of Intracellular pH in Cancer
2023Open Access
Supplementary Data from Acid-Induced Downregulation of ASS1 Contributes to the Maintenance of Intracellular pH in Cancer
2023Open Access
Data from Acid-Induced Downregulation of ASS1 Contributes to the Maintenance of Intracellular pH in Cancer
2023Open Access
Data from Acid-Induced Downregulation of ASS1 Contributes to the Maintenance of Intracellular pH in Cancer
2023Open Access
P017 Fecal wash host transcriptomics identifies inflammation throughout the colon and terminal ileum
Journal of Crohn s and Colitis·2023Open Access
Distal Fecal Wash Host Transcriptomics Identifies Inflammation Throughout the Colon and Terminal Ileum
Cellular and Molecular Gastroenterology and Hepatology·2023· 8 citedOpen Access
A spatiotemporally resolved single-cell atlas of the Plasmodium liver stage
Nature·2022· 61 cited
The cellular states and fates of shed intestinal cells
2022· 4 citedOpen Access
A spatiotemporally resolved single cell atlas of the Plasmodium liver stage
Zenodo (CERN European Organization for Nuclear Research)·2022· 1 citedOpen Access
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Frequent Co-authors

Shalev Itzkovitz(43), Ido Amit(16), Adi Egozi(13), Shani Ben‐Moshe(12), Andreas E. Moor(11), Yotam Harnik(9), Milena Rozenberg(8), Eyal David(7), Efi E. Massasa(7), Rita Manco(6), Yael Korem Kohanim(6), Amir Giladi(5), Hadas Keren‐Shaul(5), Raya Eilam(5), Hassan Massalha(5), Lisa Buchauer(5), Lydia Farack(5), Amichay Afriat(5), Oran Yakubovsky(5), Eran Elinav(4)