Saumyadipta Pyne

University of California, Santa Barbara — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

18h-index2.1kcitations142works0.32yr avg
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Research Topics

Gene expression and cancer classification(32), Single-cell and spatial transcriptomics(23), Metabolomics and Mass Spectrometry Studies(22), Cancer, Lipids, and Metabolism(19), Advanced Proteomics Techniques and Applications(10)

Publications142 total

A mathematical framework for human neutrophil state transitions inferred from single-cell RNA sequence data
Frontiers in Immunology·2025· 1 citedOpen Access
Exploring the novel protein drug target BAG33339.1 of <i>Porphyromonas gingivalis</i> : an integrative subtractive proteomics and structural dynamics study
Journal of Biomolecular Structure and Dynamics·2025· 1 cited
Automated generation of personalized trajectories of aging phenotypes with DyViA-GAN
2025Open Access
Circadian Gene Expression Analysis Using an Enhanced Circular Functional Framework
Sankhya B·2025
A mathematical framework for human neutrophil state transitions inferred from single-cell RNA sequence data
2025Open Access
Stability and Performance of Linear Combination Tests of Gene Set Enrichment for Multiple Covariance Estimators in Unbalanced Studies
2025
Disaggregation of Green Space Access, Walkability, and Behavioral Risk Factor Data for Precise Estimation of Local Population Characteristics
International Journal of Environmental Research and Public Health·2024Open Access
Focused analysis of RNFL decay in glaucomatous eyes using circular statistics on high-resolution OCT data
PLoS ONE·2023· 2 citedOpen Access
Table S5 from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Table S2 from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Table S3 from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Table S2 from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Supplementary Data from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Table S1 from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Data from Genome-wide Association Study of Prostate Cancer Mortality
2023Open Access
Table S4 from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Supplementary Figures 1 - 3, Table 1 from High-Resolution Array CGH and Gene Expression Profiling of Alveolar Soft Part Sarcoma
2023Open Access
Data from Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes
2023Open Access
Supplementary Figures 1 - 3, Table 1 from High-Resolution Array CGH and Gene Expression Profiling of Alveolar Soft Part Sarcoma
2023Open Access
Supplementary Tables and Figures from Genome-wide Association Study of Prostate Cancer Mortality
2023Open Access
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Frequent Co-authors

Geoffrey J. McLachlan(9), Sharon Lee(6), Tsung‐I Lin(5), Irina Dinu(5), Elizabeth J. Rossin(4), Pablo Tamayo(4), David A. Hafler(4), Jill P. Mesirov(4), Bruce Futcher(4), Philip L. De Jager(3), Steven J. Mentzer(3), Xinli Hu(2), Kui Wang(2), Lisa M. Maier(2), Clare Baecher‐Allan(2), Steve Skiena(2), Massimo Loda(2), Ariful Azad(2), Alex Pothen(2), Alexandra B. Ysasi(2)