Samuel A. Isaacson

Boston University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

18h-index1.0kcitations58works1.52yr avg
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Research Topics

Gene Regulatory Network Analysis(20), Diffusion and Search Dynamics(15), Stochastic processes and statistical mechanics(12), stochastic dynamics and bifurcation(9), Advanced Fluorescence Microscopy Techniques(8)

Publications58 total

Correction: Catalyst: Fast and flexible modeling of reaction networks
PLoS Computational Biology·2025Open Access
Publisher Correction: The molecular reach of antibodies crucially underpins their viral neutralisation capacity
Nature Communications·2025Open Access
A Macroscopically Consistent Reactive Langevin Dynamics Model
arXiv (Cornell University)·2025Open Access
Mean field limits of particle-based stochastic reaction-drift-diffusion models<sup>*</sup>
Nonlinearity·2025Open Access
The molecular reach of antibodies crucially underpins their viral neutralisation capacity
Nature Communications·2025· 11 citedOpen Access
An Unstructured Mesh Reaction-Drift-Diffusion Master Equation with Reversible Reactions
Bulletin of Mathematical Biology·2024
An Unstructured Mesh Reaction-Drift-Diffusion Master Equation with Reversible Reactions
arXiv (Cornell University)·2024Open Access
Extending JumpProcesses.jl for fast point process simulation with time-varying intensities
JuliaCon Proceedings·2024· 1 citedOpen Access
Catalyst: Fast and flexible modeling of reaction networks
PLoS Computational Biology·2023· 37 citedOpen Access
Fluctuation analysis for particle-based stochastic reaction–diffusion models
Stochastic Processes and their Applications·2023· 3 cited
Analysis of emergent bivalent antibody binding identifies the molecular reach as a critical determinant of SARS-CoV-2 neutralisation potency
2023· 2 citedOpen Access
Mean field limits of particle-based stochastic reaction-drift-diffusion models
arXiv (Cornell University)·2023Open Access
Strong Intracellular Signal Inactivation Produces Sharper and More Robust Signaling from Cell Membrane to Nucleus
Microscopy and Microanalysis·2023Open Access
Extending JumpProcess.jl for fast point process simulation with time-varying intensities
arXiv (Cornell University)·2023Open Access
Catalyst: Fast and flexible modeling of reaction networks
2022· 8 citedOpen Access
Catalyst: fast biochemical modeling with Julia
OpenBU (Boston University)·2022
Fluctuation analysis for particle-based stochastic reaction-diffusion models
arXiv (Cornell University)·2022Open Access
Detailed balance for particle models of reversible reactions in bounded domains
The Journal of Chemical Physics·2022· 6 citedOpen Access
Dephosphorylation accelerates the dissociation of ZAP70 from the T cell receptor
Proceedings of the National Academy of Sciences·2022· 21 citedOpen Access
Mean Field Limits of Particle-Based Stochastic Reaction-Diffusion Models
SIAM Journal on Mathematical Analysis·2022· 23 cited
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Frequent Co-authors

Omer Dushek(10), Jesse Goyette(8), Jun Allard(8), Ying Zhang(7), Charles S. Peskin(6), Konstantinos Spiliopoulos(6), Vasily Ilin(5), Mark A. Le Gros(4), Carolyn A. Larabell(4), Torkel E. Loman(4), Shashi Gowda(4), Niklas Korsbo(4), Nikhil Yewale(4), Christopher Rackauckas(4), Jingwei Ma(4), Citlali Solis Salas(4), Marcus Bridge(4), P. Anton van der Merwe(4), Junmin Wang(4), Călin Belta(4)