Joel D. Baines

Cornell University — United States

Medicine · Health Sciences

50h-index7.2kcitations137works5.02yr avg
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Research Topics

Herpesvirus Infections and Treatments(110), Virus-based gene therapy research(54), Cytomegalovirus and herpesvirus research(51), Poxvirus research and outbreaks(26), Toxin Mechanisms and Immunotoxins(17)

Publications137 total

ATRX Promotes Transcription Initiation of HSV-1 Immediate Early Genes During Early Lytic Infection
Viruses·2025Open Access
ATRX promotes transcription initiation of HSV-1 immediate early genes during early lytic infection
2025Open Access
Aberrant RNA polymerase initiation and processivity on the genome of a herpes simplex virus 1 mutant lacking ICP27
Journal of Virology·2024· 5 citedOpen Access
Correction for Rasmussen et al., “Virology—the path forward”
Journal of Virology·2024· 4 citedOpen Access
A Revision of Herpes Simplex Virus Type 1 Transcription: First, Repress; Then, Express
Microorganisms·2024· 12 citedOpen Access
Virology—the path forward
Journal of Virology·2024· 9 citedOpen Access
Herpes simplex virus 1 immediate early transcription initiation, pause-release, elongation, and termination in the presence and absence of ICP4
Journal of Virology·2023· 6 citedOpen Access
Reactivation of Epstein-Barr Virus from Latency Involves Increased RNA Polymerase Activity at CTCF Binding Sites on the Viral Genome
Journal of Virology·2023· 11 citedOpen Access
Virology under the Microscope—a Call for Rational Discourse
Journal of Virology·2023· 20 citedOpen Access
Virology under the Microscope—a Call for Rational Discourse
mBio·2023· 4 citedOpen Access
Virology under the Microscope—a Call for Rational Discourse
mSphere·2023· 8 citedOpen Access
Immediate Early Proteins of Herpes Simplex Virus Transiently Repress Viral Transcription before Subsequent Activation
Journal of Virology·2022· 11 citedOpen Access
Immediate early proteins of herpes simplex virus transiently repress viral transcription before subsequent activation
2022Open Access
Faculty Opinions recommendation of STL-seq reveals pause-release and termination kinetics for promoter-proximal paused RNA polymerase II transcripts.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2022
ICP22 of Herpes Simplex Virus 1 Decreases RNA Polymerase Processivity
Journal of Virology·2022· 15 citedOpen Access
Faculty Opinions recommendation of The PP2A-Integrator-CDK9 axis fine-tunes transcription and can be targeted therapeutically in cancer.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2021
Reactivation of Epstein Barr Virus from Latency Involves Increased RNA Polymerase Activity at CTCF Binding Sites on The Viral Genome
2021· 2 citedOpen Access
The ICP22 protein of Herpes Simplex Virus 1 promotes RNA Polymerase II activity on Viral Immediate Early Genes
2021· 1 citedOpen Access
Faculty Opinions recommendation of p53 mediates target gene association with nuclear speckles for amplified RNA expression.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2021
Faculty Opinions recommendation of An improved method for circular RNA purification using RNase R that efficiently removes linear RNAs containing G-quadruplexes or structured 3' ends.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2020
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Frequent Co-authors

Bernard Roizman(9), Richard J. Roller(8), Elizabeth Wills(6), Fan Mou(5), Kui Yang(5), Ashley E. Reynolds(4), Brandy Salmon(4), Li Liang(3), Richard Park(3), Joel Rovnak(3), David C. Johnson(2), Brent J. Ryckman(2), Sandra L. Quackenbush(2), Colin R. Parrish(2), James W. Casey(2), Charles Cunningham(2), Andrew J. Davison(2), Susan L. Bjerke(2), Yasushi Kawaguchi(2), Jeffrey M. Melancon(2)