Federico Zambelli

University of Milan — Italy

Biochemistry, Genetics and Molecular Biology · Life Sciences

31h-index4.9kcitations109works54.32yr avg
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Research Topics

Genomics and Chromatin Dynamics(24), RNA Research and Splicing(22), RNA and protein synthesis mechanisms(20), RNA modifications and cancer(20), Genomics and Phylogenetic Studies(14)

Publications108 total

A histone-centric multi-omics study shows that increased H3K4 methylation sustains triple-negative breast cancer phenotypes
Nature Communications·2025Open Access
SOX2 and NR2F1 coordinate the gene expression program of the early postnatal visual thalamus
Biology Open·2025Open Access
Author Reply to Peer Reviews of SOX2 and NR2F1 coordinate the gene expression program of the early postnatal visual thalamus
2025
Pathological PNPase variants with altered RNA binding and degradation activity affect the phenotype of bacterial and human cell models
NAR Molecular Medicine·2024· 1 citedOpen Access
Endo-bind-n-seq: identifying RNA motifs of RNA binding proteins isolated from endogenous sources
Life Science Alliance·2024· 2 citedOpen Access
Pathological PNPase variants with altered RNA binding and degradation activity affect the phenotype of bacterial and human cell models
2024Open Access
Dynamic configuration and data security for bioinformatics cloud services with the Laniakea Dashboard
NAR Genomics and Bioinformatics·2024Open Access
DOME Registry: Implementing community-wide recommendations for reporting supervised machine learning in biology
Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano)·2024Open Access
Anatomy of an ELIXIR service
Faculty of 1000 Research Ltd·2024Open Access
Referee report. For: From the establishment of a national bioinformatics society to the development of a national bioinformatics infrastructure [version 1; peer review: 2 approved with reservations]
Faculty of 1000 Research Ltd·2024Open Access
DOME Registry: implementing community-wide recommendations for reporting supervised machine learning in biology
GigaScience·2024· 4 citedOpen Access
SOX2 and NR2F1 coordinate the gene expression program of the early postnatal visual thalamus
2023Open Access
Perturbation of protein homeostasis brings plastids at the crossroad between repair and dismantling
PLoS Genetics·2023· 4 citedOpen Access
044 Gene expression profiling using next generation sequencing of primordial, primary and secondary bovine follicles
Animal - science proceedings·2023Open Access
EOSC-Pillar Use Case 6 final report: Exploring reference data through existing computing services for the bioinformatics community
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
The ELIXIR research software ecosystem
Faculty of 1000 Research Ltd·2023Open Access
The ELIXIR research software ecosystem: an open software metadata commons (BOSC track)
Faculty of 1000 Research Ltd·2023Open Access
The Laniakea Dashboard and Storage Encryption Components: A Foundation for Developing On-Demand Cloud Services for Life Science
Communications in computer and information science·2023
Using “Galaxy-rCASC”: A Public Galaxy Instance for Single-Cell RNA-Seq Data Analysis
Methods in molecular biology·2022· 2 cited
UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic mRNAs untranslated regions
Nucleic Acids Research·2022· 36 citedOpen Access
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Frequent Co-authors

Giulio Pavesi(32), Graziano Pesole(25), M. A. Tangaro(11), Matteo Chiara(11), Ernesto Picardi(8), Pietro Mandreoli(6), Anna Maria D’Erchia(6), David S. Horner(6), Roberto Mantovani(6), Diletta Dolfini(5), Björn Grüning(4), Rita Casadio(4), Silvio C. E. Tosatto(4), Tiziana Castrignanò(4), Fotis Psomopoulos(3), Rafael C. Jiménez(3), Mattia D’Antonio(3), Francesco M. Mancuso(3), Giacinto Donvito(3), Marica Antonacci(3)