Ravindra Venkatramani

Tata Institute of Fundamental Research — India

Biochemistry, Genetics and Molecular Biology · Life Sciences

21h-index1.7kcitations115works1.32yr avg
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Research Topics

Protein Structure and Dynamics(32), Molecular Junctions and Nanostructures(21), Advanced biosensing and bioanalysis techniques(18), DNA and Nucleic Acid Chemistry(15), Enzyme Structure and Function(15)

Publications115 total

Label-Free Optical Detection of Lysine Acetylation in a Protein using UV-Vis Charge Transfer Signatures
2025
AutoSIM: Redesigning and automating umbrella sampling for biomolecular conformational transitions
The Journal of Chemical Physics·2025
Synthesis, growth and optical characterization of sodium mesitylene sulphonate (SMS) crystals for THz wave generation
Optical Materials·2025· 2 cited
AutoSIM: Redesigning and automating umbrella sampling for biomolecular conformational transitions
2025Open Access
BPS2025 - Label-free detection of the extent of lysine post-translational modifications in proteins using protein charge transfer spectra
Biophysical Journal·2025
BPS2025 - Label-free detection of the extent of lysine post-translational modifications in proteins using protein charge transfer spectra
Biophysical Journal·2025
A Strategy To Access Embedded Circuits in a Single-Molecule Bis-Terpyridine Breadboard Junction
Nano Letters·2025· 1 cited
A cell-permeable fluorescent probe reveals temporally diverse PI(4,5)P2 dynamics evoked by distinct GPCR agonists in neurons
Chemical Science·2025· 2 citedOpen Access
Tunneling barriers in an extended Marcus theory of electron transfer: Incorporating effects of the bridging medium
The Journal of Chemical Physics·2024· 4 cited
mTOR signaling governs the formation of epithelial apical projection via S6K1-RhoA and aPKC-Lgl2 axes
2024· 1 citedOpen Access
A Mode Evolution Metric to Extract Reaction Coordinates for Biomolecular Conformational Transitions
Journal of Chemical Theory and Computation·2024· 1 cited
Superposition Rules for Molecular Circuits Embedded in a Single Molecule Bis-Terpyridine Breadboard Junction
2024· 1 citedOpen Access
Multiple Functional Protein–Protein Interaction Interfaces Allosterically Regulate <scp>ATP</scp> ‐Binding in Cyclin‐Dependent Kinase‐1
Proteins Structure Function and Bioinformatics·2024· 1 citedOpen Access
Crystal Growth, Terahertz Generation and Optical Characterization of Sodium Mesitylene Sulphonate (SMS)Crystal
arXiv (Cornell University)·2024· 1 citedOpen Access
A Cell-Permeable Fluorescent Probe Reveals Temporally Diverse PI(4,5)P2 Dynamics Evoked by Distinct GPCR Agonists in Neurons
2024Open Access
Author response for "Multiple Functional Protein–Protein Interaction Interfaces Allosterically Regulate &lt;scp&gt;ATP&lt;/scp&gt;‐Binding in Cyclin‐Dependent Kinase‐1"
2024
Electron Tunneling Barriers in Marcus Theory of Electron Transfer: Incorporating Bridge State Thermal Fluctuations
2024· 1 citedOpen Access
Electron Tunneling Barriers in Marcus Theory of Electron Transfer: Incorporating Bridge State Thermal Fluctuations
2024· 1 citedOpen Access
A Mode Evolution Metric to Extract Converged Reaction Coordinates for Biomolecular Conformational Transitions
2024Open Access
ATP-Binding Free Energy Simulations Reveal an Allosteric Link Between the Enzyme Active Site and Multiple Functional Protein-Protein Interaction Interfaces in Cyclin Dependent Kinase-1
2024Open Access
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Frequent Co-authors

David N. Beratan(10), Shahar Keinan(8), Imon Mandal(7), Alexander Balaeff(7), Sandeep Chakraborty(6), Basuthkar J. Rao(6), Bjarni Ásgeirsson(6), Abhaya M. Dandekar(6), Emil Wierzbiński(5), David H. Waldeck(5), Catalina Achim(4), Sanjoy Paul(4), Ravi Radhakrishnan(4), Rajaram Swaminathan(3), Kathryn L. Davis(3), Silvia Bezer(3), Jyotishman Dasgupta(3), Sudipta Maiti(3), Charu Seth(3), Veerabhadrarao Kaliginedi(3)