Christopher Ruis

MRC Laboratory of Molecular Biology — United Kingdom

Medicine · Health Sciences

25h-index7.4kcitations52works18.72yr avg
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Research Topics

SARS-CoV-2 and COVID-19 Research(18), Genomics and Phylogenetic Studies(13), Viral gastroenteritis research and epidemiology(12), Evolution and Genetic Dynamics(11), Animal Virus Infections Studies(8)

Publications52 total

Mutational spectra reveal influenza virus transmission routes and adaptation
2025Open Access
Metabolic control of porin permeability influences antibiotic resistance in Escherichia coli
Nature Microbiology·2025· 1 citedOpen Access
Within-host bacterial evolution and the emergence of pathogenicity
Nature Microbiology·2025· 3 cited
Corrigendum: Progressive evolution of Streptococcus equi from Streptococcus equi subsp. zooepidemicus and adaption to equine hosts
Microbial Genomics·2025Open Access
Progressive evolution of Streptococcus equi from Streptococcus equi subsp. zooepidemicus and adaption to equine hosts
Microbial Genomics·2025· 3 citedOpen Access
Signatures of omicron-like adaptation in early SARS-CoV-2 variants and chronic infection
2024· 2 citedOpen Access
Standardized Phylogenetic Classification of Human Respiratory Syncytial Virus Below the Subgroup Level
Emerging infectious diseases·2024· 59 citedOpen Access
Evolution and host-specific adaptation of<i>Pseudomonas aeruginosa</i>
Science·2024· 91 citedOpen Access
Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny
2024· 16 citedOpen Access
The unified proposal for classification of human respiratory syncytial virus below the subgroup level
2024· 11 citedOpen Access
A framework for automated scalable designation of viral pathogen lineages from genomic data
Nature Microbiology·2024· 19 citedOpen Access
Mutational spectra are associated with bacterial niche
Nature Communications·2023· 15 citedOpen Access
SARS-CoV-2 evolution in the Omicron era
Nature Microbiology·2023· 127 cited
A molnupiravir-associated mutational signature in global SARS-CoV-2 genomes
Nature·2023· 189 citedOpen Access
Impact of transient acquired hypermutability on the inter- and intra-species competitiveness of <i>Pseudomonas aeruginosa</i>
The ISME Journal·2023· 6 citedOpen Access
Calculating and applying pathogen mutational spectra using MutTui
2023· 5 citedOpen Access
A lung-specific mutational signature enables inference of viral and bacterial respiratory niche
Microbial Genomics·2023· 20 citedOpen Access
Automated Agnostic Designation of Pathogen Lineages
2023· 4 citedOpen Access
A molnupiravir-associated mutational signature in global SARS-CoV-2 genomes
2023· 27 citedOpen Access
Mutational spectra distinguish SARS-CoV-2 replication niches
2022· 10 citedOpen Access
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Frequent Co-authors

Andrew Rambaut(14), Oliver G. Pybus(13), Julian Parkhill(13), Áine O’Toole(12), Thomas P. Peacock(10), Judith Breuer(10), Verity Hill(8), R. Andrés Floto(8), John T. McCrone(7), Louis du Plessis(7), Aaron Weimann(7), Cornelius Roemer(7), Ben Jackson(7), Angie S. Hinrichs(7), Gerry Tonkin‐Hill(6), Nuno R. Faria(6), Moritz U. G. Kraemer(6), Josephine M. Bryant(6), Julianne R. Brown(6), Jakob McBroome(6)