Brandon J. Mannion

Lawrence Berkeley National Laboratory — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

19h-index5.4kcitations43works30.82yr avg
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Research Topics

Genomics and Chromatin Dynamics(21), RNA Research and Splicing(14), Congenital heart defects research(10), Autism Spectrum Disorder Research(8), RNA modifications and cancer(7)

Publications38 total

Functional architecture of cardiac TF regulatory landscapes in control of mammalian heart development
2025Open Access
Uncovering hidden enhancers through unbiased in vivo testing
Nature Communications·2025· 5 citedOpen Access
A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival
Nature Communications·2024· 6 citedOpen Access
Increased enhancer–promoter interactions during developmental enhancer activation in mammals
Nature Genetics·2024· 76 citedOpen Access
Conserved enhancers control notochord expression of vertebrate Brachyury
Nature Communications·2023· 13 citedOpen Access
Conserved enhancer logic controls the notochord expression of vertebrate <i>Brachyury</i>
2023· 2 citedOpen Access
Single cell evaluation of endocardial <i>Hand2</i> gene regulatory networks reveals HAND2-dependent pathways that impact cardiac morphogenesis
Development·2023· 14 citedOpen Access
Increased Enhancer-Promoter Interactions during Developmental Enhancer Activation in Mammals
2022· 11 citedOpen Access
Cis-regulatory architecture and functions of a gene desert controlling pleiotropic expression and cardiac pacemaker development
European Heart Journal·2022Open Access
Single cell evaluation of endocardial HAND2 gene regulatory networks reveals critical HAND2 dependent pathways impacting cardiac morphogenesis
2022Open Access
Genome-wide fetalization of enhancer architecture in heart disease
Cell Reports·2022· 38 citedOpen Access
Uncovering Hidden Enhancers Through Unbiased <i>In Vivo</i> Testing
2022· 10 citedOpen Access
Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism
Human Genomics·2021· 33 citedOpen Access
Ultraconserved enhancer function does not require perfect sequence conservation
Nature Genetics·2021· 90 citedOpen Access
Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development
Nature·2021· 16 citedOpen Access
Additional file 1 of Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism
Figshare·2021Open Access
Additional file 4 of Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism
Figshare·2021Open Access
Additional file 6 of Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism
Figshare·2021Open Access
Additional file 5 of Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism
Figshare·2021Open Access
Additional file 3 of Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism
Figshare·2021Open Access
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Frequent Co-authors

L Pennacchio(32), Diane E. Dickel(28), Jennifer A. Akiyama(25), Axel Visel(25), Ingrid Plajzer-Frick(19), Iros Barozzi(18), Veena Afzal(17), Momoe Kato(15), Tyler H. Garvin(14), Marco Osterwalder(13), Quan Pham(13), David U. Gorkin(12), Riana D. Hunter(12), Elizabeth A. Lee(11), Catherine S. Novak(11), Y. Fukuda(10), Javier López-Rı́os(10), Anne Harrington(9), Evin M. Padhi(7), Tristan J. Hayeck(7)