Matias Kirst

University of Florida — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

47h-index13.4kcitations180works5.92yr avg
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Research Topics

Genetic Mapping and Diversity in Plants and Animals(37), Genetic and phenotypic traits in livestock(30), Bioenergy crop production and management(30), Plant Molecular Biology Research(24), Forest ecology and management(24)

Publications179 total

InteracTor: Feature engineering and explainable AI for profiling protein structure-interaction-function relationships
PLoS Computational Biology·2025Open Access
Single-nucleus transcriptomics revealed auxin-driven mechanisms of wood plasticity to enhance severe drought tolerance in poplar
Genome biology·2025· 2 citedOpen Access
Convergent evolution of <i>NFP</i> -facilitated root nodule symbiosis
Proceedings of the National Academy of Sciences·2025Open Access
Deep tissue profiling of Populus stem at single nucleus level reveals uncharacterized cell types and cell-specific gene regulatory networks
Genome biology·2025· 2 citedOpen Access
A Circadian Light Regulator Controls a Core CAM Gene in the Ice Plant's C3-to-CAM Transition
2025Open Access
InteracTor: Feature Engineering and Explainable AI for Profiling Protein Structure-Interaction-Function Relationships
2025· 1 citedOpen Access
Single-nuclei transcriptomics revealed auxin-driven mechanisms of wood plasticity and severe drought tolerance in poplar
2025· 3 citedOpen Access
Investigating biological nitrogen fixation via single-cell transcriptomics
Journal of Experimental Botany·2024· 4 citedOpen Access
InteracTor: A new integrative feature extraction toolkit for improved characterization of protein structural properties
2024· 2 citedOpen Access
Genomic selection in western redcedar: from proof of concept to operational application
New Phytologist·2024· 5 citedOpen Access
Author Correction: Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants
Nature Communications·2024· 1 citedOpen Access
Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants
Nature Communications·2024· 30 citedOpen Access
The single-cell transcriptome program of nodule development cellular lineages in Medicago truncatula
Cell Reports·2024· 31 citedOpen Access
Mesophyll-Specific Circadian Dynamics of CAM Induction in the Ice Plant Unveiled by Single-Cell Transcriptomics
2024· 10 citedOpen Access
Mesophyll-Specific Circadian Dynamics of CAM Induction in the Ice Plant Unveiled by Single-Cell Transcriptomics
2024· 4 citedOpen Access
Complementary files - The Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in <i>Medicago truncatula</i>
Figshare·2024Open Access
Bringing CAM photosynthesis to the table: Paving the way for resilient and productive agricultural systems in a changing climate
Plant Communications·2023· 11 citedOpen Access
The Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in <i>Medicago truncatula</i>
2023· 2 citedOpen Access
Material and methods to increase plant growth and yield
OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)·2023Open Access
Materials and methods to increase plant growth and yield
OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)·2023Open Access
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Frequent Co-authors

Márcio F. R. Resende(14), Patricio Muńoz(11), Christopher Dervinis(11), John M. Davis(9), Dário Grattapaglia(8), Leandro G. Neves(8), Evandro Novaes(7), Gary F. Peter(7), Ronald R. Sederoff(6), Daniel Conde(5), Derek Drost(4), Marcos Deon Vilela de Resende(4), Dudley A. Huber(4), W. Brad Barbazuk(4), David B. Neale(4), C. Dana Nelson(3), G. F. Peter(3), Γεώργιος Παππάς(3), Leon V. Kochian(3), Salvador A. Gezan(3)