James Emmanuel San

Duke Medical Center — United States

Medicine · Health Sciences

17h-index2.3kcitations49works4.02yr avg
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Research Topics

SARS-CoV-2 and COVID-19 Research(26), Animal Virus Infections Studies(11), Viral gastroenteritis research and epidemiology(8), Bacteriophages and microbial interactions(8), Hepatitis B Virus Studies(7)

Publications49 total

Conserved recombination patterns across hepatitis B genotypes: a retrospective study
Virology Journal·2025· 2 citedOpen Access
Conserved recombination patterns across hepatitis B genotypes: a retrospective study
2025Open Access
“The COVID-19 pandemic in BRICS: Milestones, interventions, and molecular epidemiology”
PLOS Global Public Health·2024Open Access
Predictors of HIV seroconversion in Botswana
AIDS·2024· 2 citedOpen Access
An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable for Genomic Surveillance Within Clinical Diagnostic Settings
International Journal of Molecular Sciences·2024· 1 citedOpen Access
An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable For Genomic Surveillance Within Clinical Diagnostic Settings
Preprints.org·2024· 1 citedOpen Access
An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable For Genomic Surveillance Within Clinical Diagnostic Settings
Preprints.org·2024Open Access
Impacts of climate change-related human migration on infectious diseases
Nature Climate Change·2024· 18 citedOpen Access
Understanding the Transmission Dynamics of the Chikungunya Virus in Africa
Pathogens·2024· 5 citedOpen Access
A metagenomic investigation of the faecal RNA virome structure of asymptomatic chickens obtained from a commercial farm in Durban, KwaZulu-Natal province, South Africa
BMC Genomics·2024· 5 citedOpen Access
Understanding the Transmission Dynamics of the Chikungunya Virus in Africa
Preprints.org·2024· 2 citedOpen Access
Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny
2024· 16 citedOpen Access
An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable For Genomic Surveillance Within Clinical Diagnostic Settings
2024· 4 citedOpen Access
Phylogenetic evidence of extensive spatial mixing of diverse HIV-1 group M lineages within Cameroon but not between its neighbours
Virus Evolution·2024· 3 citedOpen Access
Bacterial Diversity in Placentas from Complicated Pregnancies Using 16s rRNA Gene Sequencing
Archives of Obstetrics and Gynaecology·2024· 2 citedOpen Access
Emergence of Omicron FN.1 a descendent of BQ.1.1 in Botswana
Virus Evolution·2024· 3 citedOpen Access
Metronidazole Treatment Failure and Persistent BV Lead to Increased Frequencies of Activated T- and Dendritic-Cell Subsets
Microorganisms·2023· 12 citedOpen Access
SeqPanther: Sequence manipulation and mutationstatistics toolset
The Journal of Open Source Software·2023· 1 citedOpen Access
Complete Hepatitis B Virus Sequencing using an ONT-Based Next-Generation Sequencing Protocol v1
2023Open Access
Performance of rapid antigen tests in identifying Omicron BA.4 and BA.5 infections in South Africa
Journal of Clinical Virology·2023· 3 citedOpen Access
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Frequent Co-authors

Túlio de Oliveira(40), Houriiyah Tegally(34), Eduan Wilkinson(31), Jennifer Giandhari(22), Richard Lessells(21), Sureshnee Pillay(19), Darren P. Martin(19), Monika Moir(16), Cheryl Baxter(16), Derek Tshiabuila(14), Yeshnee Naidoo(13), Tongai Maponga(11), Stephanie van Wyk(10), Marta Giovanetti(9), Daniel G. Amoako(9), Lavanya Singh(9), Wonderful T. Choga(8), Wolfgang Preiser(8), Yajna Ramphal(7), Carolyn Williamson(7)