Gene W. Tyson

Queensland University of Technology — Australia

Environmental Science · Physical Sciences

84h-index49.7kcitations305works13.02yr avg
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Research Topics

Microbial Community Ecology and Physiology(135), Genomics and Phylogenetic Studies(90), Methane Hydrates and Related Phenomena(74), Gut microbiota and health(40), Climate change and permafrost(27)

Publications300 total

Gut microbiota is different before the development of preeclampsia
Pregnancy Hypertension·2026Open Access
Population ecology and biogeochemical implications of ssDNA and dsDNA viruses along a permafrost thaw gradient
Nature Communications·2025Open Access
Understanding microbial ecology and evolution with single-cell genomics
Nature Reviews Genetics·2025· 1 cited
Bin Chicken: targeted metagenomic coassembly for the efficient recovery of novel genomes
Nature Methods·2025· 1 cited
Potential for aerobic hydrocarbon oxidation in archaea
Nature Communications·2025· 1 citedOpen Access
Carbon monoxide metabolism in freshwater anaerobic methanotrophic archaea
2025· 1 citedOpen Access
Microbial matchmakers: Bifidobacterium evolution across animal hosts
Cell Host & Microbe·2025
Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper
Nature Biotechnology·2025· 45 cited
Metagenomic Sequencing Enables Clinically Relevant Identification of 176 Targets from Faecal Samples
2025Open Access
Protozoal populations drive system-wide variation in the rumen microbiome
Nature Communications·2025· 2 citedOpen Access
A human microbiome-derived therapeutic for ulcerative colitis promotes mucosal healing and immune homeostasis: a randomized, controlled Phase 1 trial in healthy volunteers
2025Open Access
Sa1924: NOVEL ASSOCIATIONS BETWEEN DIET, GASTRO-INTESTINAL SYMPTOMS, PSYCHOLOGICAL WELL-BEING AND THE MICROBIOME OF AN AUSTRALIAN ARMY COHORT
Gastroenterology·2025
A human microbiome-derived therapeutic for ulcerative colitis promotes mucosal healing and immune homeostasis
2025· 1 citedOpen Access
Differences in diet-microbiome associations dependent on dietary collection methods for proximal and habitual dietary intake
Proceedings of The Nutrition Society·2025Open Access
CoverM: read alignment statistics for metagenomics
Bioinformatics·2025· 241 citedOpen Access
Mobile genetic elements that shape microbial diversity and functions in thawing permafrost soils
2025· 5 citedOpen Access
From Archaea to the atmosphere: remotely sensing Arctic methane
2025· 2 cited
Stable states in an unstable landscape: microbial resistance at the front line of climate change
2025· 5 cited
P-1953. Youden’s Index Ensures the Accuracy of Wastewater-based Surveillance of SARS-CoV-2 Variants by Allele-Specific RT-qPCR or Genomic Sequencing
Open Forum Infectious Diseases·2025Open Access
Aerobic hydrocarbon oxidation in a novel archaeal lineage
2025Open Access
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Frequent Co-authors

Philip Hugenholtz(25), Donovan H. Parks(12), Ben J. Woodcroft(11), Jillian F. Banfield(8), Michael Imelfort(7), Paul G. Dennis(6), Brett J. Baker(5), Paul N. Evans(5), S. R. Saleska(5), Virginia I. Rich(5), Inka Vanwonterghem(5), Connor T. Skennerton(4), Eric E. Allen(4), Rachna J. Ram(4), Edward F. DeLong(4), Caitlin M. Singleton(4), Suzanne B. Hodgkins(4), Patrick Crill(4), Jeffrey P. Chanton(4), Nathan C. VerBerkmoes(4)