Verena Kaynig

Harvard University Press — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

14h-index71.8kcitations23works0.02yr avg
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Research Topics

Cell Image Analysis Techniques(16), Advanced Electron Microscopy Techniques and Applications(9), Medical Image Segmentation Techniques(5), Electron and X-Ray Spectroscopy Techniques(4), Functional Brain Connectivity Studies(3)

Publications23 total

Guided Proofreading of Automatic Segmentations for Connectomics
2018· 27 cited
Scalable Interactive Visualization for Connectomics
Informatics·2017· 29 citedOpen Access
Guided Proofreading of Automatic Segmentations for Connectomics
arXiv (Cornell University)·2017· 3 citedOpen Access
ICON: An interactive approach to train deep neural networks for segmentation of neuronal structures
2017· 9 cited
Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification
Bioinformatics·2017· 2.4k cited
RhoanaNet Pipeline: Dense Automatic Neural Annotation
arXiv (Cornell University)·2016· 22 citedOpen Access
Icon: An Interactive Approach to Train Deep Neural Networks for Segmentation of Neuronal Structures
arXiv (Cornell University)·2016Open Access
Trainable_Segmentation: Release v3.1.2
INFM-OAR (INFN Catania)·2016· 35 citedOpen Access
Imaging a 1 mm 3 Volume of Rat Cortex Using a MultiBeam SEM
Microscopy and Microanalysis·2016· 14 citedOpen Access
Automatic Neural Reconstruction from Petavoxel of Electron Microscopy Data
Microscopy and Microanalysis·2016· 14 citedOpen Access
Saturated Reconstruction of a Volume of Neocortex
Cell·2015· 1.1k citedOpen Access
Large-scale automatic reconstruction of neuronal processes from electron microscopy images
Medical Image Analysis·2015· 117 cited
Visualization in Connectomics
Mathematics and visualization·2014· 26 cited
Trainable Weka Segmentation: A Machine Learning Tool for Microscopy Image Segmentation
2014· 37 cited
Large-Scale Automatic Reconstruction of Neuronal Processes from Electron Microscopy Images
arXiv (Cornell University)·2013· 7 citedOpen Access
Large-Scale Automatic Reconstruction of Neuronal Processes from Electron\n Microscopy Images
arXiv (Cornell University)·2013· 8 citedOpen Access
Fiji: an open-source platform for biological-image analysis
Nature Methods·2012· 67.7k citedOpen Access
Visualization in Connectomics
arXiv (Cornell University)·2012· 9 citedOpen Access
Neuron geometry extraction by perceptual grouping in ssTEM images
2010· 95 cited
Fully automatic stitching and distortion correction of transmission electron microscope images
Journal of Structural Biology·2010· 73 cited
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Frequent Co-authors

Hanspeter Pfister(14), Thouis R. Jones(9), Jeff W. Lichtman(9), Daniel Haehn(7), Narayanan Kasthuri(6), Seymour Knowles-Barley(5), Johannes Schindelin(4), Ignacio Arganda‐Carreras(4), Albert Cardona(4), Richard Schalek(4), Amelio Vázquez-Reina(4), Joachim M. Buhmann(4), Curtis Rueden(3), H. Sebastian Seung(3), Mike Roberts(3), Bernd Fischer(3), Felix Gonda(3), Alyssa M. Wilson(3), Toufiq Parag(3), James Tompkin(3)