James F. Holden

University of Massachusetts Amherst — United States

Environmental Science · Physical Sciences

31h-index4.4kcitations134works1.62yr avg
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Research Topics

Methane Hydrates and Related Phenomena(49), Microbial Community Ecology and Physiology(29), Hydrocarbon exploration and reservoir analysis(24), Genomics and Phylogenetic Studies(14), Microbial Fuel Cells and Bioremediation(13)

Publications134 total

Key role of hydrogen in regulating hydrogenases and the reductive TCA cycle in a thermophilic, autotrophic sulfur-reducing bacterium
Applied and Environmental Microbiology·2025Open Access
Metabolic and population profiles of active subseafloor autotrophs in young oceanic crust at deep-sea hydrothermal vents
Applied and Environmental Microbiology·2025Open Access
A Comprehensive Framework for Assessing Terrestrial Analogue Field Sites for Ocean Worlds
Journal of Geophysical Research Planets·2025Open Access
Microbes in deep-sea volcanoes can help scientists learn about early life on Earth, or even life beyond our planet
2025
The Clumped Isotope Signatures of Multiple Methanogenic Metabolisms
Environmental Science & Technology·2025· 5 citedOpen Access
<i>Pyrodictium</i>
Bergey's Manual of Systematics of Archaea and Bacteria·2025
Metabolic and Population Profiles of Active Subseafloor Autotrophs in Young Oceanic Crust at Deep-Sea Hydrothermal Vents
2025Open Access
Formate addition enhanced hydrogen production by Thermococcus paralvinellae when grown on brewery wastewater
Frontiers in Microbiology·2025· 1 citedOpen Access
The Small Cycloamylose (CA15) Synthesizing Properties of 4-α-Glucanotransferase from Hyperthermophilic Archaeon <i>Pyrobaculum arsenaticum</i> with Its Distinct Disproportionation Activity
Journal of Agricultural and Food Chemistry·2025· 2 cited
The clumped isotope signatures of multiple methanogenesis metabolisms
2024· 3 citedOpen Access
A Comprehensive Framework for Assessing Terrestrial Analogue Field Sites for Ocean Worlds
2024Open Access
Non-thermodynamic factors affect competition between thermophilic chemolithoautotrophs from deep-sea hydrothermal vents
Applied and Environmental Microbiology·2024· 8 citedOpen Access
Fe(III) (oxyhydr)oxide reduction by the thermophilic iron-reducing bacterium Desulfovulcanus ferrireducens
Frontiers in Microbiology·2023· 10 citedOpen Access
Non-Deterministic Factors Affect Competition Between Thermophilic Autotrophs from Deep-Sea Hydrothermal Vents
ARPHA Conference Abstracts·2023· 1 citedOpen Access
Formate and hydrogen in hydrothermal vents and their use by extremely thermophilic methanogens and heterotrophs
Frontiers in Microbiology·2023· 21 citedOpen Access
Acceptor dependent catalytic properties of GH57 4-α-glucanotransferase from Pyrococcus sp. ST04
Frontiers in Microbiology·2022· 5 citedOpen Access
Spectral Detection of Nanophase Iron Minerals Produced by Fe(III)-Reducing Hyperthermophilic Crenarchaea
Astrobiology·2022· 5 citedOpen Access
Desulfovulcanus ferrireducens gen. nov., sp. nov., a thermophilic autotrophic iron and sulfate-reducing bacterium from subseafloor basalt that grows on akaganéite and lepidocrocite minerals
Extremophiles·2022· 3 citedOpen Access
Detection of Mineral Products Following FE(III) Oxide Reduction by a Thermophilic Autotrophic Bacterium Using Reflectance Spectroscopies
Lunar and Planetary Science Conference·2021
Bioreduction of Nanophase Ferrihydrite, Akaganeite, and Lepidocrocite by the Autotrophic Thermophile Desulfothermobacter Ferrireducens as Seen Through Mössbauer Spectroscopy
Lunar and Planetary Science Conference·2021
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Frequent Co-authors

D. A. Butterfield(10), Lucy C. Stewart(6), Julie A. Huber(6), Jong‐Hyun Jung(6), Cheon‐Seok Park(6), Michael W. W. Adams(5), H. C. Ver Eecke(5), Deborah S. Kelley(5), Marvin D. Lilley(4), John A. Baross(4), M. D. Dyar(4), Begüm D. Topçuoğlu(4), John W. Jamieson(4), John R. Delaney(3), Srishti Kashyap(3), David A. Clague(3), Dong‐Ho Seo(3), T. Jennifer Lin(3), David T. Wang(2), Danielle S. Gruen(2)