Ram Samudrala

University at Buffalo, State University of New York — United States

Computer Science · Physical Sciences

46h-index8.3kcitations266works0.92yr avg
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Research Topics

Computational Drug Discovery Methods(67), Protein Structure and Dynamics(59), Bioinformatics and Genomic Networks(37), RNA and protein synthesis mechanisms(34), Genetics, Bioinformatics, and Biomedical Research(34)

Publications264 total

Deciphering bisphenol A (BPA)-elicited osteoarthritis mechanisms through network toxicology and molecular docking, then de novo generation of novel therapeutic candidates
BMC Pharmacology and Toxicology·2025Open Access
Strategies for robust, accurate, and generalizable benchmarking of drug discovery platforms
Bioinformatics·2025Open Access
Uncovering novel therapeutics for schizophrenia: a multitarget approach using the CANDO platform
2025Open Access
Multiscale analysis and optimal glioma therapeutic candidate discovery using the CANDO platform
2025· 1 citedOpen Access
Strategies for Robust, Accurate, and Generalisable Benchmarking of Drug Discovery Platforms
2024Open Access
Accurate informatic modeling of tooth enamel pellicle interactions by training substitution matrices with Mat4Pep
Frontiers in Materials·2024Open Access
Strategies for robust, accurate, and generalizable benchmarking of drug discovery platforms
2024· 1 citedOpen Access
The implications of APOBEC3-mediated C-to-U RNA editing for human disease
Communications Biology·2024· 7 citedOpen Access
Predicting the effectiveness of combination treatment of dolutegravir and fluoxetine for depressive disorders in HIV
Elsevier eBooks·2024
Contributors
Elsevier eBooks·2024Open Access
“TimBre” Pilot Study Conducted Using Multi-Country Training and Validation Data for Screening of Pulmonary Tuberculosis Using Cough (Acoustic Sounds), Clinical & Demographic Inputs
Journal of Pulmonology Research & Reports·2023Open Access
The Role of C-to-U RNA Editing in Human Biodiversity and Disease
2023Open Access
The Role of C-to-U RNA Editing in Human Biodiversity
2023· 4 citedOpen Access
Faculty Opinions recommendation of Next-Generation Sequencing of Minimal Residual Disease for Predicting Relapse after Tisagenlecleucel in Children and Young Adults with Acute Lymphoblastic Leukemia.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2023
Effective holistic characterization of small molecule effects using heterogeneous biological networks
Frontiers in Pharmacology·2023· 13 citedOpen Access
The impact of nucleosome structure on CRISPR/Cas9 fidelity
Nucleic Acids Research·2023· 20 citedOpen Access
Antiviral Approaches against Influenza Virus
Clinical Microbiology Reviews·2023· 137 citedOpen Access
Multiscale Analysis and Validation of Effective Drug Combinations Targeting Driver KRAS Mutations in Non-Small Cell Lung Cancer
International Journal of Molecular Sciences·2023· 8 citedOpen Access
Computational Grafting of Epitopes
Methods in molecular biology·2023
MULTISCALE ANALYSIS AND VALIDATION OF EFFECTIVE DRUG COMBINATIONS TARGETING DRIVER KRAS MUTATIONS IN NON-SMALL CELL LUNG CANCER
2022· 1 citedOpen Access
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Frequent Co-authors

Ekachai Jenwitheesuk(7), Michael Levitt(6), Enoch S. Huang(5), Jeremy A. Horst(5), Jason McDermott(4), Yu Xia(4), Ersin Emre Ören(4), Candan Tamerler(4), Kai Wang(4), Gaurav Chopra(4), Jun Wang(3), Gane Ka‐Shu Wong(3), John Moult(3), Mehmet Sarıkaya(3), Zackary Falls(3), Pamela S. Soltis(2), Aaron D. Goldman(2), Fred Heffron(2), Jianguo Zhang(2), Hongkun Zheng(2)